RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 KCNRGQ8N5I3 272 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 LINC00052Q96N35 136 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
PDLIM5-213ENST00000509357 A0A087X0K7 114 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 HMSDA8MTL9 139 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 F6UB75 175 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 MPDU1O75352 247 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 NDUFB4O95168 129 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 CFDP00746 253 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 SPP1P10451 314 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 S100A7P31151 101 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 ID1P41134 155 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF726P1Q15940 193 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 FFAR4Q5NUL3 377 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 C1orf194Q5T5A4 169 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 C10orf113Q5VZT2 155 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 RNF182Q8N6D2 247 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 HSD17B11Q8NBQ5 300 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 SAT2Q96F10 170 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 MFFQ9GZY8 342 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
PDLIM5-213ENST00000509357 NUPR2A6NF83 97 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 DEFB4AO15263 64 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 COX7A2P2O60397 106 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 C1QBP02746 253 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 NKX2-5P52952 324 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 NUTF2P61970 127 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF345Q14585 488 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 TMEM41BQ5BJD5 291 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 TRPT1Q86TN4 253 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 RPP25LQ8N5L8 163 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 C11orf45Q8TAV5 145 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 KLK5Q9Y337 293 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
PDLIM5-213ENST00000509357 PRAC2D3DTV9 90 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF705DP0CH99 300 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF705BP0CI00 300 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 C4BPBP20851 252 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 GALR1P47211 349 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 PXDC1Q5TGL8 231 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 FAM78BQ5VT40 261 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 TMUB2Q71RG4 321 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 FXYD5Q96DB9 178 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 CLEC5AQ9NY25 188 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 BOLA1Q9Y3E2 137 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 TIMM9Q9Y5J7 89 aa6.37□□□□□ -1.39
PDLIM5-213ENST00000509357 ELOA3CA0A087WX78 387 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF705FA8MVS1 300 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 BCL2L11O43521 198 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 IFNA5P01569 189 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 ATF4P18848 351 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 FHITP49789 147 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 NANOS2P60321 138 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 RAB31Q13636 194 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 EBLN2Q6P2I7 272 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 Q6ZRG5 221 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 AKAP14Q86UN6 197 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 INO80EQ8NBZ0 244 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 OR4B1Q8NGF8 309 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 PHYHIPLQ96FC7 376 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 C16orf92Q96LL3 132 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 PSMG3Q9BT73 122 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 C1QTNF4Q9BXJ3 329 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF331Q9NQX6 463 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 RPRMQ9NS64 109 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 XCL2Q9UBD3 114 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 FUT9Q9Y231 359 aa6.36□□□□□ -1.39
PDLIM5-213ENST00000509357 A8MTW9 85 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 H3BMM0 161 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 M0R3E3 92 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 LY6G6CO95867 125 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 OR10J4P0C629 311 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 RPL7P18124 248 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 PSMB3P49720 205 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 MEOX2P50222 304 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF266Q14584 549 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 FAM122CQ6P4D5 195 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 AMTNQ6UX39 209 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 ZNF709Q8N972 641 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 OR1L4Q8NGR5 311 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 SCGB1C1Q8TD33 95 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 PHLDA1Q8WV24 401 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 PFDN5Q99471 154 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 LYSTQ99698 3801 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 ARPC5LQ9BPX5 153 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 C11orf68Q9H3H3 251 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 TMEM14CQ9P0S9 112 aa6.35□□□□□ -1.39
PDLIM5-213ENST00000509357 TRBV19A0A075B6N1 114 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 IGHV3OR16-12A0A075B7B8 117 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms