RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MPC2O95563 127 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 CXCL3P19876 107 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 MPDU1O75352 247 aa11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 HLA-DMBP28068 263 aa11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 PSG3Q16557 428 aa11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 OR1L4Q8NGR5 311 aa11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-212ENST00000509333 H3BQ15 152 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 FGF7P21781 194 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 B2MP61769 119 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 BAXQ07812 192 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 NEU1Q99519 415 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 ALG5Q9Y673 324 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 PXMP4Q9Y6I8 212 aa11.64□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 PTTG1O95997 202 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 LRRC20Q8TCA0 184 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 HRH4Q9H3N8 390 aa11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-212ENST00000509333 NUPR2A6NF83 97 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 THAP6Q8TBB0 222 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 PFDN5Q99471 154 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 MFFQ9GZY8 342 aa11.62□□□□□ -0.55
PDLIM5-212ENST00000509333 HYDINQ4G0P3 5121 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 H3BTX0 84 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 CXCL2P19875 107 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 CLINT1Q14677 625 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 LCN15Q6UWW0 184 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 OR11H7Q8NGC8 314 aa11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 WDR61Q9GZS3 305 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 KLK5Q9Y337 293 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-212ENST00000509333 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 RPL12P30050 165 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
PDLIM5-212ENST00000509333 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 SLC17A3O00476 420 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 JTBO76095 146 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 FCN2Q15485 313 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
PDLIM5-212ENST00000509333 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 GUK1Q16774 197 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 MED28Q9H204 178 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 WFDC1Q9HC57 220 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 MBD2Q9UBB5 411 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 GOLT1BQ9Y3E0 138 aa11.58□□□□□ -0.56
PDLIM5-212ENST00000509333 AMBPP02760 352 aa11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 PET100P0DJ07 73 aa11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 HIST1H1AQ02539 215 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 ATP5SQ99766 215 aa11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
PDLIM5-212ENST00000509333 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 M0R2Z0 102 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 ZNF253O75346 499 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 NDUFB4O95168 129 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 PRM2P04554 102 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 RHOBP62745 196 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 SMIM3Q9BZL3 60 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
PDLIM5-212ENST00000509333 TMEM189A5PLL7 270 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 PYYP10082 97 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 Q5BKY6 102 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 Q6ZTC4 211 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 SCGB1C1Q8TD33 95 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 C2CD4CQ8TF44 421 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
PDLIM5-212ENST00000509333 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms