RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 OPCMLQ14982 345 aa17.46■□□□□ 0.39
SRPK1-210ENST00000508473 ZNF738Q8NE65 137 aa17.46■□□□□ 0.39
SRPK1-210ENST00000508473 PPP1R1CQ8WVI7 109 aa17.46■□□□□ 0.39
SRPK1-210ENST00000508473 CLUHP3Q96NS8 147 aa17.46■□□□□ 0.39
SRPK1-210ENST00000508473 IGHV3OR16-12A0A075B7B8 117 aa17.45■□□□□ 0.38
SRPK1-210ENST00000508473 RPL29P47914 159 aaKnown RBP17.45■□□□□ 0.38
SRPK1-210ENST00000508473 B2MP61769 119 aa17.45■□□□□ 0.38
SRPK1-210ENST00000508473 OR5C1Q8NGR4 320 aa17.45■□□□□ 0.38
SRPK1-210ENST00000508473 SLC39A9Q9NUM3 307 aa17.45■□□□□ 0.38
SRPK1-210ENST00000508473 TRAV5A0A0B4J249 113 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 H3BTX0 84 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 CXCL3P19876 107 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 CLINT1Q14677 625 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 OR1L4Q8NGR5 311 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 THAP6Q8TBB0 222 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 MFFQ9GZY8 342 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 PXMP4Q9Y6I8 212 aa17.44■□□□□ 0.38
SRPK1-210ENST00000508473 CNN1P51911 297 aaKnown RBP17.43■□□□□ 0.38
SRPK1-210ENST00000508473 BPIFA4PQ86YQ2 179 aa17.43■□□□□ 0.38
SRPK1-210ENST00000508473 RNF126Q9BV68 326 aa17.43■□□□□ 0.38
SRPK1-210ENST00000508473 KLK5Q9Y337 293 aaPredicted RBP17.43■□□□□ 0.38
SRPK1-210ENST00000508473 PLECQ15149 4684 aaKnown RBP17.43■□□□□ 0.38
SRPK1-210ENST00000508473 PSG3Q16557 428 aa17.42■□□□□ 0.38
SRPK1-210ENST00000508473 ALG5Q9Y673 324 aa17.42■□□□□ 0.38
SRPK1-210ENST00000508473 DUSP14O95147 198 aaKnown RBP17.41■□□□□ 0.38
SRPK1-210ENST00000508473 MPC2O95563 127 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 AMTNQ6UX39 209 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 ZNF705AQ6ZN79 300 aaPredicted RBP17.41■□□□□ 0.38
SRPK1-210ENST00000508473 CHAC2Q8WUX2 184 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 PFDN5Q99471 154 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 NPCDR1Q9BY65 106 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 LYSTQ99698 3801 aa17.41■□□□□ 0.38
SRPK1-210ENST00000508473 HIST1H1AQ02539 215 aaPredicted RBP17.4■□□□□ 0.38
SRPK1-210ENST00000508473 LCN15Q6UWW0 184 aa17.4■□□□□ 0.38
SRPK1-210ENST00000508473 A8MTW9 85 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 ZNF705FA8MVS1 300 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-210ENST00000508473 H3BQ15 152 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 SLC17A3O00476 420 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 MPDU1O75352 247 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 PTTG1O95997 202 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 CXCL2P19875 107 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 GCSAMLQ5JQS6 135 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 OR11H7Q8NGC8 314 aa17.39■□□□□ 0.37
SRPK1-210ENST00000508473 ZNF331Q9NQX6 463 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-210ENST00000508473 M0R2Z0 102 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 PET100P0DJ07 73 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 IGLC2P0DOY2 106 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 SPINK13Q1W4C9 94 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 C1orf158Q8N1D5 194 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 OR8A1Q8NGG7 326 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 RPUSD4Q96CM3 377 aaKnown RBP17.38■□□□□ 0.37
SRPK1-210ENST00000508473 SLC50A1Q9BRV3 221 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 HRH4Q9H3N8 390 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 MBD2Q9UBB5 411 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 CELA1Q9UNI1 258 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 GOLT1BQ9Y3E0 138 aa17.38■□□□□ 0.37
SRPK1-210ENST00000508473 ALMS1Q8TCU4 4167 aa17.37■□□□□ 0.37
SRPK1-210ENST00000508473 EMP1P54849 157 aa17.37■□□□□ 0.37
SRPK1-210ENST00000508473 RHOBP62745 196 aa17.37■□□□□ 0.37
SRPK1-210ENST00000508473 ZNF767PQ75MW2 155 aa17.37■□□□□ 0.37
SRPK1-210ENST00000508473 NEU1Q99519 415 aa17.37■□□□□ 0.37
SRPK1-210ENST00000508473 WDR61Q9GZS3 305 aaKnown RBP17.37■□□□□ 0.37
SRPK1-210ENST00000508473 DNAH1Q9P2D7 4330 aa17.36■□□□□ 0.37
SRPK1-210ENST00000508473 SMIM3Q9BZL3 60 aa17.36■□□□□ 0.37
SRPK1-210ENST00000508473 HSPB11Q9Y547 144 aa17.36■□□□□ 0.37
SRPK1-210ENST00000508473 Q6ZTC4 211 aa17.35■□□□□ 0.37
SRPK1-210ENST00000508473 LINC00476Q8WZB0 136 aa17.35■□□□□ 0.37
SRPK1-210ENST00000508473 IGF2BP2-AS1Q96M15 143 aa17.35■□□□□ 0.37
SRPK1-210ENST00000508473 PPP1R14DQ9NXH3 145 aa17.35■□□□□ 0.37
SRPK1-210ENST00000508473 ZNF586Q9NXT0 402 aa17.35■□□□□ 0.37
SRPK1-210ENST00000508473 SMIM9A6NGZ8 99 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 LY6G6CO95867 125 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 RPL12P30050 165 aaKnown RBP17.34■□□□□ 0.37
SRPK1-210ENST00000508473 BAP18Q8IXM2 172 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 SAT2Q96F10 170 aaPredicted RBP17.34■□□□□ 0.37
SRPK1-210ENST00000508473 ATP5SQ99766 215 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 TMEM208Q9BTX3 173 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 RFNGQ9Y644 331 aa17.34■□□□□ 0.37
SRPK1-210ENST00000508473 TRAV12-2A0A075B6T6 113 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 PRAC2D3DTV9 90 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 BOLA2-SMG1P6H3BVE0 249 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 CRXO43186 299 aaPredicted RBP17.33■□□□□ 0.36
SRPK1-210ENST00000508473 AMBPP02760 352 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 FCN2Q15485 313 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 C12orf74Q32Q52 190 aa17.33■□□□□ 0.36
SRPK1-210ENST00000508473 INSP01308 110 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 HBE1P02100 147 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 PYYP10082 97 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 GUK1Q16774 197 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 C2CD4CQ8TF44 421 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 MED28Q9H204 178 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 HYDINQ4G0P3 5121 aa17.32■□□□□ 0.36
SRPK1-210ENST00000508473 MIR17HGQ75NE6 70 aa17.31■□□□□ 0.36
SRPK1-210ENST00000508473 TMEM14CQ9P0S9 112 aa17.31■□□□□ 0.36
SRPK1-210ENST00000508473 LOC102723971A0A1B0GUV8 181 aa17.3■□□□□ 0.36
SRPK1-210ENST00000508473 TMEM189A5PLL7 270 aa17.3■□□□□ 0.36
SRPK1-210ENST00000508473 C11orf94C9JXX5 98 aa17.3■□□□□ 0.36
SRPK1-210ENST00000508473 C17orf112F2Z3M2 114 aa17.3■□□□□ 0.36
SRPK1-210ENST00000508473 PRM2P04554 102 aa17.3■□□□□ 0.36
SRPK1-210ENST00000508473 RRN3P1Q2M238 152 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms