RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.62
TCOF1-207ENST00000504761 SHANK2-AS3Q9BTD1 123 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 CD7P09564 240 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 DTX2Q86UW9 622 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 Q8N7P7 452 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 OR11H6Q8NGC7 330 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 PRELID3AQ96N28 172 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 PEMTQ9UBM1 199 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
TCOF1-207ENST00000504761 GGTLC3B5MD39 225 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 FCN3O75636 299 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 SERF1AO75920 110 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 NUDT3O95989 172 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 IGLC1P0CG04 106 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
TCOF1-207ENST00000504761 CBY3A6NI87 242 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 PLA2G5P39877 138 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 EMP1P54849 157 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 DEFB112Q30KQ8 113 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 USMG5Q96IX5 58 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
TCOF1-207ENST00000504761 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-207ENST00000504761 NMUP48645 174 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 BRWD1-AS2P59051 145 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 BLCAPP62952 87 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 PEF1Q9UBV8 284 aaKnown RBP11.18□□□□□ -0.62
TCOF1-207ENST00000504761 ERCC8Q13216 396 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 VAMP3Q15836 100 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 LINC00518Q8N0U6 118 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 LINC01587Q99440 93 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 COL4A2P08572 1712 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 C1orf229Q6ZS94 237 aaPredicted RBP11.18□□□□□ -0.62
TCOF1-207ENST00000504761 C10orf105Q8TEF2 133 aa11.18□□□□□ -0.62
TCOF1-207ENST00000504761 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 CGB3P0DN86 165 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 CGB7P0DN87 165 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 DAZAP2Q15038 168 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-207ENST00000504761 C8orf31Q8N9H6 132 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 G0S2P27469 103 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 REC114Q7Z4M0 266 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
TCOF1-207ENST00000504761 PRR20EP86478 221 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 PRR20CP86479 221 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 PRR20DP86480 221 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 PRR20BP86481 221 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 PRR20AP86496 221 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 TMEM170AQ8WVE7 144 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 H3BVH4 76 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 HOXA5P20719 270 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 DEFB104AQ8WTQ1 72 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
TCOF1-207ENST00000504761 CFAP54Q96N23 3096 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 ACANP16112 2415 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 IFITM10A6NMD0 228 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-207ENST00000504761 FXYD7P58549 80 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 YPEL3P61236 119 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-207ENST00000504761 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
TCOF1-207ENST00000504761 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
TCOF1-207ENST00000504761 SAP30O75446 220 aa11.15□□□□□ -0.62
TCOF1-207ENST00000504761 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
TCOF1-207ENST00000504761 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
TCOF1-207ENST00000504761 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
TCOF1-207ENST00000504761 PMCHL2Q9BQD1 86 aa11.15□□□□□ -0.62
TCOF1-207ENST00000504761 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.63
TCOF1-207ENST00000504761 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.63
TCOF1-207ENST00000504761 OR4C46A6NHA9 309 aa11.15□□□□□ -0.63
TCOF1-207ENST00000504761 PKIAP61925 76 aa11.15□□□□□ -0.63
TCOF1-207ENST00000504761 ORMDL3Q8N138 153 aa11.15□□□□□ -0.63
TCOF1-207ENST00000504761 FOLR2P14207 255 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 FOXL1Q12952 345 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 PSG3Q16557 428 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 DEFB113Q30KQ7 82 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
TCOF1-207ENST00000504761 ZNF138P52744 262 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 EVI2AP22794 236 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 MORN5Q5VZ52 161 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 Q6AWC8 147 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 STHQ8IWL8 128 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 NUP35Q8NFH5 326 aa11.14□□□□□ -0.63
TCOF1-207ENST00000504761 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms