RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 UPK3BQ9BT76 320 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 RPL26L1Q9UNX3 145 aaKnown RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 MICAL3Q7RTP6 2002 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 SCN3AQ9NY46 2000 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 MYH1P12882 1939 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 LOC107986453A0A1B0GWG9 222 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 INSL4Q14641 139 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 Q8IYB0 196 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 TMEM106BQ9NUM4 274 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 BET1LQ9NYM9 111 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 RPRD2Q5VT52 1461 aaKnown RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 MED1Q15648 1581 aaPredicted RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 RIMBP3CA6NJZ7 1639 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 RIMBP3BA6NNM3 1639 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 RIMBP3Q9UFD9 1639 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 TRAV3A0A0B4J244 114 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 SLC25A6P12236 298 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 SLC25A16P16260 332 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 PEBP1P30086 187 aaKnown RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 DCDP81605 110 aaKnown RBP3.49□□□□□ -1.85
NIPBL-204ENST00000504430 FGF13Q92913 245 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 MYLKQ15746 1914 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 IGKV1OR2-108A0A075B7D4 117 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 GNGT2O14610 69 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 IGHV4-34P06331 123 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 ZNF22P17026 224 aaPredicted RBP3.48□□□□□ -1.85
NIPBL-204ENST00000504430 FAM182AQ5T1J6 154 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 ZNF322Q6U7Q0 402 aaPredicted RBP3.48□□□□□ -1.85
NIPBL-204ENST00000504430 C14orf178Q8N769 122 aaPredicted RBP3.48□□□□□ -1.85
NIPBL-204ENST00000504430 OR5AK2Q8NH90 309 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 SLC50A1Q9BRV3 221 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 CARMIL3Q8ND23 1372 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 IFT140Q96RY7 1462 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 LOC107984156A0A0G2JMH3 177 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 C3orf85A0A1B0GTC6 90 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 K7ERS5 55 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 BPY2O14599 106 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 HLA-DQA1P01909 254 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 ARL17AQ8IVW1 177 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 C10orf111Q8N326 155 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
NIPBL-204ENST00000504430 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 CACNA1DQ01668 2161 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 ROBO1Q9Y6N7 1651 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 ANKRD36BQ8N2N9 1353 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 RP1P56715 2156 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 MALRD1Q5VYJ5 2156 aa3.48□□□□□ -1.85
NIPBL-204ENST00000504430 IGLV3-12A0A075B6K2 115 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 TCRBV3S1A0A5B6 114 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 C10orf91Q5T1B1 145 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 LYZL1Q6UWQ5 148 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 Q6ZR03 302 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 LYZL2Q7Z4W2 148 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 VOPP1Q96AW1 172 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 ADGRB3O60242 1522 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 ARHGEF28Q8N1W1 1705 aaKnown RBP3.47□□□□□ -1.85
NIPBL-204ENST00000504430 IGKV2D-30A0A075B6S6 120 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 M0R2P5 195 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 GOLGA2P5Q9HBQ8 144 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 ARHGAP21Q5T5U3 1957 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.47□□□□□ -1.85
NIPBL-204ENST00000504430 A0A0D9SG52 128 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 A6NN06 94 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 TMEM262E9PQX1 116 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 TIMM17BO60830 172 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 UBL3O95164 117 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 TFF1P04155 84 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 FABP4P15090 132 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 YPEL3P61236 119 aaPredicted RBP3.47□□□□□ -1.85
NIPBL-204ENST00000504430 NOP16Q9Y3C1 178 aaKnown RBP3.47□□□□□ -1.85
NIPBL-204ENST00000504430 ARAP2Q8WZ64 1704 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 LRRIQ1Q96JM4 1722 aa3.47□□□□□ -1.85
NIPBL-204ENST00000504430 SH2D1AO60880 128 aa3.46□□□□□ -1.85
NIPBL-204ENST00000504430 IGHV1-69P01742 117 aa3.46□□□□□ -1.85
NIPBL-204ENST00000504430 RBM3P98179 157 aaKnown RBP3.46□□□□□ -1.85
NIPBL-204ENST00000504430 TSLPQ969D9 159 aa3.46□□□□□ -1.85
NIPBL-204ENST00000504430 NRKQ7Z2Y5 1582 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 C17orf98A8MV24 154 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 KRTAP29-1A8MX34 341 aaPredicted RBP3.46□□□□□ -1.86
NIPBL-204ENST00000504430 NDUFB6O95139 128 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 IGHV3-30-3P0DP02 117 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 OR2T2Q6IF00 324 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 MED9Q9NWA0 146 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 ICOSQ9Y6W8 199 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 CHD1O14646 1710 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 NSD3Q9BZ95 1437 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 IGKV1D-37A0A075B6S9 117 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 LYZP61626 148 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 TMEM155Q4W5P6 130 aa3.46□□□□□ -1.86
NIPBL-204ENST00000504430 OR5AS1Q8N127 324 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms