RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LAMB2P55268 1798 aa1.47□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRPM7Q96QT4 1865 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ITGB4P16144 1822 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV8-1A0A0A6YYK1 113 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV3OR16-9A0A0B4J2B5 98 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV1-24A0A0C4DH33 117 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM236AA0A1B0GUQ0 79 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM236BA0A1B0GV22 79 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 WI2-2373I1.2A0A1W2PRP0 233 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PLAC8L1A1L4L8 177 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PGPA6NDG6 321 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF727A8MUV8 499 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 C9JQL5 133 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 H3BUT2 72 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 K7EMT4 169 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FXYD1O00168 92 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NDUFB3O43676 98 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PDCD6O75340 191 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF324O75467 553 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PGLYRP1O75594 196 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NXPH4O95158 308 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 EPPINO95925 133 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV3-7P01780 117 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 C1QAP02745 245 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ATP1B1P05026 303 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 SRP19P09132 144 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 HOXB7P09629 217 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CXCL8P10145 99 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 COX8AP10176 69 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CTLA4P16410 223 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CRISP2P16562 243 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 COL8A2P25067 703 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FKBP2P26885 142 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PTGDSP41222 190 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 GFERP55789 205 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NPC2P61916 151 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 SNRPFP62306 86 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 DAZ2Q13117 558 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ERCC8Q13216 396 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF726P1Q15940 193 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 LGALS9BQ3B8N2 356 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CFAP126Q5VTH2 177 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PVRIGQ6DKI7 326 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 Q6P435 159 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 REG3GQ6UW15 175 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF493Q6ZR52 646 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF571Q7Z3V5 609 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 DAZ4Q86SG3 579 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 SBSPONQ8IVN8 264 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 OR5AS1Q8N127 324 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CSNK1G2-AS1Q8NCQ2 148 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 OR8B3Q8NGG8 313 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 STAG3L4Q8TBR4 150 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 LMX1AQ8TE12 382 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FGF13Q92913 245 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM230Q96A57 120 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM3DQ96BQ1 224 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGF2BP2-AS1Q96M15 143 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 OR8B2Q96RD0 313 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 GPX7Q96SL4 187 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 C20orf78Q9BR46 151 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 TM2D3Q9BRN9 247 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 HDHD3Q9BSH5 251 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 GNB1LQ9BYB4 327 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 CST11Q9H112 138 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 PLEKHF2Q9H8W4 249 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NRN1Q9NPD7 142 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 MANBALQ9NQG1 85 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 DAZ3Q9NR90 486 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPUSD1Q9UJJ7 312 aaKnown RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 AMMECR1Q9Y4X0 333 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRIP11Q15643 1979 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 MAST2Q6P0Q8 1798 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NCKAP5O14513 1909 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 RICTORQ6R327 1708 aa1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 NUP210Q8TEM1 1887 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P17-201ENST00000504195 LOC285556D6RIA3 1793 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 DENND4CQ5VZ89 1909 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2L5PA0A1B0GUS4 154 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 A0A1B0GXF2 115 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 A8MWL6 223 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 OOSP1A8MZH6 123 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 H3BT86 120 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 J3QT63 122 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2L6O14933 153 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 BCE1O60756 84 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 SCRG1O75711 98 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 NUDT14O95848 222 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 APCSP02743 223 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CD3DP04234 171 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 C3orf79P0CE67 100 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 COX6A1P12074 109 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGLL1P15814 213 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 LGALS3P17931 250 aaKnown RBP1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL1P22362 96 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 CBLN1P23435 193 aa1.45□□□□□ -2.18
HMGB3P17-201ENST00000504195 SAA4P35542 130 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms