RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CFAP161Q6P656 301 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 LIME1Q9H400 295 aa13.08□□□□□ -0.31
HMGXB3-202ENST00000503427 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 A8MWV9 139 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 PRR31Q5SQ13 230 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 PDE6HQ13956 83 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 Q8TAT8 98 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 SIGMAR1Q99720 223 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 SHANK2-AS3Q9BTD1 123 aa13.08□□□□□ -0.32
HMGXB3-202ENST00000503427 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 IGKV3D-20A0A0C4DH25 116 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 BPESC1Q9GZL8 116 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 A0A1W2PRX2 142 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 SRD5A1P18405 259 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
HMGXB3-202ENST00000503427 ZNF492Q9P255 531 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 H3BUX3 64 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 Q6ZR03 302 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 TMEM219Q86XT9 240 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 ERG28Q9UKR5 140 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 A0A087X0K7 114 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 A8MWP6 167 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 IGF2-ASQ6U949 168 aa13.06□□□□□ -0.32
HMGXB3-202ENST00000503427 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 IGKV1-39P01597 117 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 IGKV1D-39P04432 117 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 DOCK7Q96N67 2140 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 SPOCK3Q9BQ16 436 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 FAM215AQ9Y5M1 114 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 USF3Q68DE3 2245 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 SRRM4A7MD48 611 aaKnown RBP13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 PIEZO1Q92508 2521 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 CFHR2P36980 270 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 ZNF726P1Q15940 193 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 RSPO1Q2MKA7 263 aaPredicted RBP13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 RNF138Q8WVD3 245 aa13.05□□□□□ -0.32
HMGXB3-202ENST00000503427 VCYO14598 125 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 CT83Q5H943 113 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 LY6HO94772 140 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 GHRHP01286 108 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 UBE2V1Q13404 147 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 AMN1Q8IY45 258 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 SSC4DQ8WTU2 575 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 USMG5Q96IX5 58 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 PCNX1Q96RV3 2341 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 TDGF1P3P51864 188 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 PLA2G5P39877 138 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 FXYD7P58549 80 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 TMEM158Q8WZ71 300 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
HMGXB3-202ENST00000503427 IGLV3-9A0A075B6K5 115 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 IGLV3-1P01715 115 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 GATA3P23771 443 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 RIPPLY3P57055 190 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 MORN3Q6PF18 240 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 POLR3KQ9Y2Y1 108 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 TRGV4A0A0C4DH28 118 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 FAM223BA6NKX1 122 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 FAM223AQ8IWN6 122 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 ZNF876PQ49A33 203 aa13.03□□□□□ -0.32
HMGXB3-202ENST00000503427 CD5LO43866 347 aa13.02□□□□□ -0.32
HMGXB3-202ENST00000503427 NDPQ00604 133 aa13.02□□□□□ -0.32
HMGXB3-202ENST00000503427 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.32
HMGXB3-202ENST00000503427 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.32
HMGXB3-202ENST00000503427 NAA38Q9BRA0 125 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 WDR86Q86TI4 376 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 M0R2P5 195 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 IL15RAQ13261 267 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 IGFL2Q6UWQ7 119 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 LURAP1LQ8IV03 231 aa13.02□□□□□ -0.33
HMGXB3-202ENST00000503427 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 ARMS2P0C7Q2 107 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 MALP21145 153 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 SAA4P35542 130 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 ZNF562Q6V9R5 426 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 DKK1O94907 266 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 RCHY1Q96PM5 261 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
HMGXB3-202ENST00000503427 UBE2E1P51965 193 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms