RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CDK5R1Q15078 307 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ESRGQ1W209 222 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 HAGHLQ6PII5 290 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 SMG6Q86US8 1419 aaKnown RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR4X2Q8NGF9 303 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR10AC1Q8NH08 325 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 CHCHD1Q96BP2 118 aaKnown RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 PKMYT1Q99640 499 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 Q9BRP9 147 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 GGACTQ9BVM4 153 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 C14orf132Q9NPU4 83 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 IBTKQ9P2D0 1353 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF407Q9C0G0 2248 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 LCTP09848 1927 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 SCRIBQ14160 1630 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 BCL9LQ86UU0 1499 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 DSPPQ9NZW4 1301 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NUP210LQ5VU65 1888 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NUP210Q8TEM1 1887 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NYNRINQ9P2P1 1898 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 MYH10P35580 1976 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 DOCK4Q8N1I0 1966 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 A0A1B0GVG6 124 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NPFFO15130 113 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 GNG7O60262 68 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR1I1O60431 355 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 PROSCO94903 275 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 HBDP02042 147 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 TCRAP04437 139 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 SLC25A5P05141 298 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 CTSGP08311 255 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 P0C880 135 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 HLA-DRB4P13762 266 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 MIFP14174 115 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 AKR1D1P51857 326 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 MAXP61244 160 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 MRPS10P82664 201 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NEDD8Q15843 81 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 NNATQ16517 81 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 TAF9Q16594 264 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF791Q3KP31 576 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 IDO2Q6ZQW0 420 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF826PQ6ZT77 177 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR5D14Q8NGL3 314 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR2T35Q8NGX2 323 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 CXCL16Q9H2A7 254 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 BANF2Q9H503 90 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 GNG8Q9UK08 70 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 TNFSF18Q9UNG2 199 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 HLA-DRB4X5D2U9 266 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 PTPRSQ13332 1948 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 ROCK2O75116 1388 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 OBSL1O75147 1896 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 SCAF11Q99590 1463 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 PHLPP1O60346 1717 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 ARHGEF28Q8N1W1 1705 aaKnown RBP1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 WDR90Q96KV7 1748 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 SHANK3Q9BYB0 1731 aa1.18□□□□□ -2.22
HMGB1P35-201ENST00000503360 MYH7BA7E2Y1 1941 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 KDM6AO15550 1401 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 ERBINQ96RT1 1412 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 IGLV10-54A0A075B6I4 117 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRAV27A0A087WT01 109 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMSB15BA0A087X1C1 80 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 FNDC10F2Z333 226 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 CDC42EP2O14613 210 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 YPEL1O60688 119 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 UBL3O95164 117 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 SHBGP04278 402 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 SAA1P0DJI8 122 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 MGST1P10620 155 aaKnown RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 FABP4P15090 132 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 HIST1H1BP16401 226 aaKnown RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 CSRP1P21291 193 aaKnown RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 GUCA1AP43080 201 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF181Q2M3W8 571 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM91Q6ZNR0 172 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 Q6ZTI0 123 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TEN1Q86WV5 123 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 HYLS1Q96M11 299 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 C12orf57Q99622 126 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 RETNLBQ9BQ08 111 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TCEAL7Q9BRU2 100 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TAF9BQ9HBM6 251 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 CCDC167Q9P0B6 97 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 CCL26Q9Y258 94 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 TPRKBQ9Y3C4 175 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 ANKRD31Q8N7Z5 1873 aa1.17□□□□□ -2.22
HMGB1P35-201ENST00000503360 PIK3C2AO00443 1686 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PTPRGP23470 1445 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PRG4Q92954 1404 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 KIAA1107Q9UPP5 1409 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 LOC107986453A0A1B0GWG9 222 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 IBA57-AS1B1ANH7 110 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF670-ZNF695F2Z2N8 137 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 ATP6V1G2-DDX39BF2Z307 99 aa1.16□□□□□ -2.22
HMGB1P35-201ENST00000503360 M0R233 179 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms