RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CT83Q5H943 113 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.55
CHTOP-206ENST00000495554 SAMD13Q5VXD3 122 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 ATP5L2Q7Z4Y8 100 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 DYNAPQ8N1N2 210 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 RNF125Q96EQ8 232 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 PRSS22Q9GZN4 317 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF492Q9P255 531 aa11.65□□□□□ -0.55
CHTOP-206ENST00000495554 IGSF10Q6WRI0 2623 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 SCGB1A1P11684 91 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
CHTOP-206ENST00000495554 Q8N6K4 173 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 TRBV19A0A075B6N1 114 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 KIR2DL5BA0A0G2JN68 375 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 KIR2DL5BA0A0G2JPC4 375 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 GNG7O60262 68 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 IL4P05112 153 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 KIR2DL5AQ8N109 375 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 TTC9CQ8N5M4 171 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 FANCD2OSQ96PS1 177 aa11.64□□□□□ -0.55
CHTOP-206ENST00000495554 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 A8MWL6 223 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 P01737 135 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 GPX1P07203 203 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 EXOC3-AS1Q8N2X6 119 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 COL12A1Q99715 3063 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 ACACBO00763 2458 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 OVOL3O00110 214 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 SAP30O75446 220 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 ID1P41134 155 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 MFAP4P55083 255 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
CHTOP-206ENST00000495554 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 OR4C5Q8NGB2 326 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
CHTOP-206ENST00000495554 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 THYN1Q9P016 225 aa11.63□□□□□ -0.55
CHTOP-206ENST00000495554 K7ERU9 68 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 C1orf194Q5T5A4 169 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 Q86TA4 180 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 BOD1L2Q8IYS8 172 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 TMEM8BA6NDV4 472 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF705DP0CH99 300 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF705BP0CI00 300 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 CD33P20138 364 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 LMO4P61968 165 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 NDPQ00604 133 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 RCHY1Q96PM5 261 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 TBX15Q96SF7 602 aa11.62□□□□□ -0.55
CHTOP-206ENST00000495554 CITED2Q99967 270 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-206ENST00000495554 TRAV8-1A0A0A6YYK1 113 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 NDUFB8O95169 186 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 RPS20P60866 119 aaKnown RBP11.61□□□□□ -0.55
CHTOP-206ENST00000495554 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 GFRA4Q9GZZ7 299 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 SOX21Q9Y651 276 aaPredicted RBP11.61□□□□□ -0.55
CHTOP-206ENST00000495554 A0A1W2PS18 150 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 VWC2LB2RUY7 222 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 HLA-DRB1P01911 266 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 FCGR2BP31994 310 aaPredicted RBP11.61□□□□□ -0.55
CHTOP-206ENST00000495554 TCF24Q7RTU0 167 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 S4R3C0 116 aa11.61□□□□□ -0.55
CHTOP-206ENST00000495554 FAM231BA6NCW3 169 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 OR2J3O76001 311 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 TOX4O94842 621 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 FAM106CPP0CH98 169 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 AMTP48728 403 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 CAMPP49913 170 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 RAB9AP51151 201 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 ATP5J2P56134 94 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 TOMM20LQ6UXN7 152 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
CHTOP-206ENST00000495554 UBE2E1P51965 193 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 HBBP68871 147 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 Q56UQ5 140 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 C18orf32Q8TCD1 76 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
CHTOP-206ENST00000495554 F8W735 103 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms