RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TRIOBPQ9H2D6 2365 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 A0A1W2PPI3 338 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 LYZP61626 148 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 LCNL1Q6ZST4 164 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 FAM216BQ8N7L0 139 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 FER1L6-AS2Q96M78 137 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 ZNF48Q96MX3 618 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-210ENST00000493582 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
HDAC4-210ENST00000493582 KALRNO60229 2985 aa9.27□□□□□ -0.92
HDAC4-210ENST00000493582 PRSS1P07477 247 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 CKS2P33552 79 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 ZNF493Q6ZR52 646 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 C8orf46Q8TAG6 207 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 RPUSD1Q9UJJ7 312 aaKnown RBP9.27□□□□□ -0.93
HDAC4-210ENST00000493582 SPENQ96T58 3664 aaKnown RBP9.27□□□□□ -0.93
HDAC4-210ENST00000493582 TRGV5A0A0B4J1U4 118 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 PRRG2O14669 202 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 Q6ZT83 130 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 RITA1Q96K30 269 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 U3KQK5 164 aa9.27□□□□□ -0.93
HDAC4-210ENST00000493582 A0A1B0GW15 77 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 PATE3B3GLJ2 98 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 FCER1GP30273 86 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 ODF1Q14990 250 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 RAB9BQ9NP90 201 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
HDAC4-210ENST00000493582 NPIPB5A8MRT5 1133 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 K7ESF4 209 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 GATA3P23771 443 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM95Q3KNT9 176 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM167AQ8TBQ9 72 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 INS-IGF2F8WCM5 200 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 M0R3E3 92 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 LHBP01229 141 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 CXCL12P48061 93 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 MBNL2Q5VZF2 373 aaKnown RBP9.26□□□□□ -0.93
HDAC4-210ENST00000493582 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 TRGV9Q99603 122 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 MRPL16Q9NX20 251 aaKnown RBP9.26□□□□□ -0.93
HDAC4-210ENST00000493582 PRO0461Q9UI25 63 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 HIGD1AQ9Y241 93 aa9.26□□□□□ -0.93
HDAC4-210ENST00000493582 PLCE1Q9P212 2302 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 IGHV1-18A0A0C4DH31 117 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 ROS1P08922 2347 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 A6NJY4 79 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 SPINK8P0C7L1 97 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 HOXB4P17483 251 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-210ENST00000493582 LEPP41159 167 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 MZT1Q08AG7 82 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 ZNF833PQ6ZTB9 187 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
HDAC4-210ENST00000493582 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-210ENST00000493582 KLRC4-KLRK1H3BQV0 150 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 APOMO95445 188 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 OR4C13Q8NGP0 309 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 IGKCP01834 107 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 CRYGCP07315 174 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM164Q5U3C3 297 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 C8orf86Q6ZUL3 223 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 ZNF71Q9NQZ8 489 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 CCL3L1P16619 93 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 TWIST1Q15672 202 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 GAFA1Q96PS6 74 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 FOXC2Q99958 501 aa9.24□□□□□ -0.93
HDAC4-210ENST00000493582 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 IGLV2-23P01705 113 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 Q6AWC8 147 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM178AQ8NBL3 297 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 OR10X1Q8NGY0 326 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 PIFOQ8TCI5 191 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM133Q9H2Q1 129 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 CDIP1Q9H305 208 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 TRAV40A0A0B4J280 105 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 ZNF502Q8TBZ5 544 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 MSRB1Q9NZV6 116 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 LINC00312Q9Y6C7 94 aa9.23□□□□□ -0.93
HDAC4-210ENST00000493582 EVI2AP22794 236 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 FOXI1Q12951 378 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 TMEM75Q8N9X5 138 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 GLMPQ8WWB7 406 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 HIST1H4GQ99525 98 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 ENSAO43768 121 aaKnown RBP9.22□□□□□ -0.93
HDAC4-210ENST00000493582 FHL3Q13643 280 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
HDAC4-210ENST00000493582 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
HDAC4-210ENST00000493582 ZNF418Q8TF45 676 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms