RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 FRAS1Q86XX4 4008 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 LOC102723971A0A1B0GUV8 181 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 A6NHS1 94 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
PTPRU-207ENST00000492954 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
PTPRU-207ENST00000492954 RAB32Q13637 225 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 MORN5Q5VZ52 161 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 UQCC1Q9NVA1 299 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 RNF24Q9Y225 148 aa12.88□□□□□ -0.35
PTPRU-207ENST00000492954 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-207ENST00000492954 UPK1BO75841 260 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 AMBPP02760 352 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 CAMLGP49069 296 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-207ENST00000492954 PSG3Q16557 428 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 TMEM208Q9BTX3 173 aa12.87□□□□□ -0.35
PTPRU-207ENST00000492954 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-207ENST00000492954 RAB31Q13636 194 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 OPCMLQ14982 345 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 C10orf113Q5VZT2 155 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 BAP18Q8IXM2 172 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 PLA2G2EQ9NZK7 142 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 WDR83OSQ9Y284 106 aa12.86□□□□□ -0.35
PTPRU-207ENST00000492954 YTHDF2Q9Y5A9 579 aaKnown RBP12.86□□□□□ -0.35
PTPRU-207ENST00000492954 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 H3BTX0 84 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 INSP01308 110 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 PRM2P04554 102 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 CXCL2P19875 107 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 SULT1A1P50225 295 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 IFITM3Q01628 133 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 VWC2Q2TAL6 325 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 LCN15Q6UWW0 184 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 BPIFA4PQ86YQ2 179 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
PTPRU-207ENST00000492954 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
PTPRU-207ENST00000492954 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-207ENST00000492954 TRAV12-2A0A075B6T6 113 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 ZNF705GA8MUZ8 300 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-207ENST00000492954 SLC17A3O00476 420 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 SIX6O95475 246 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 S100A11P31949 105 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 RHOBP62745 196 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 BAXQ07812 192 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 Q6ZRG5 221 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 STX12Q86Y82 276 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-207ENST00000492954 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 DNAH10Q8IVF4 4471 aa12.84□□□□□ -0.35
PTPRU-207ENST00000492954 TRAV5A0A0B4J249 113 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 HBG1P69891 147 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 HBG2P69892 147 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 PPP1R14DQ9NXH3 145 aa12.83□□□□□ -0.36
PTPRU-207ENST00000492954 H3BQ15 152 aa12.82□□□□□ -0.36
PTPRU-207ENST00000492954 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
PTPRU-207ENST00000492954 RPL29P47914 159 aaKnown RBP12.82□□□□□ -0.36
PTPRU-207ENST00000492954 OR1L4Q8NGR5 311 aa12.82□□□□□ -0.36
PTPRU-207ENST00000492954 SLC39A9Q9NUM3 307 aa12.82□□□□□ -0.36
PTPRU-207ENST00000492954 HTN3P15516 51 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 FGF7P21781 194 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 B2MP61769 119 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-207ENST00000492954 PFDN5Q99471 154 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 PXMP4Q9Y6I8 212 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
PTPRU-207ENST00000492954 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
PTPRU-207ENST00000492954 DAD1P61803 113 aa12.8□□□□□ -0.36
PTPRU-207ENST00000492954 OXA1LQ15070 435 aa12.8□□□□□ -0.36
PTPRU-207ENST00000492954 LRRC37A5PQ49AS3 106 aa12.8□□□□□ -0.36
PTPRU-207ENST00000492954 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 AZU1P20160 251 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 NHLH2Q02577 135 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 LINC01587Q99440 93 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
PTPRU-207ENST00000492954 PRAF2O60831 178 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 P0DMU3 169 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 TSPOP30536 169 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 CDKN1BP46527 198 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 TMEM256Q8N2U0 113 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
PTPRU-207ENST00000492954 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms