RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 HAGHLQ6PII5 290 aaPredicted RBP0.85□□□□□ -2.27
CLK1-213ENST00000492793 CROCCP2Q86T23 111 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 Q8TAT8 98 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 GINS3Q9BRX5 216 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 TMEM70Q9BUB7 260 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 SH3BGRL3Q9H299 93 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 LYRM2Q9NU23 88 aaPredicted RBP0.85□□□□□ -2.27
CLK1-213ENST00000492793 UFC1Q9Y3C8 167 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 FREM3P0C091 2139 aa0.85□□□□□ -2.27
CLK1-213ENST00000492793 UHRF1BP1Q6BDS2 1440 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 E5RI56 91 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 IFNA4P05014 189 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 PRB4P10163 310 aaPredicted RBP0.84□□□□□ -2.27
CLK1-213ENST00000492793 OGNP20774 298 aaKnown RBP0.84□□□□□ -2.27
CLK1-213ENST00000492793 KLRD1Q13241 179 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 NEK7Q8TDX7 302 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 LYSMD1Q96S90 227 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 MAP1LC3BQ9GZQ8 125 aa0.84□□□□□ -2.27
CLK1-213ENST00000492793 CACYBPQ9HB71 228 aaKnown RBP0.84□□□□□ -2.27
CLK1-213ENST00000492793 CITO14578 2027 aa0.84□□□□□ -2.28
CLK1-213ENST00000492793 ZGRF1Q86YA3 2104 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 ODAMA1E959 279 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 K7ERJ3 54 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 RER1O15258 196 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 PIAS1O75925 651 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 TRGC2P03986 189 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 NEFHP12036 1026 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 COX7CP15954 63 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 INSL3P51460 131 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 CRYBA4P53673 196 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 MSMO1Q15800 293 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 HYLS1Q96M11 299 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 WFDC10AQ9H1F0 79 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 BOLA2Q9H3K6 86 aa0.83□□□□□ -2.28
CLK1-213ENST00000492793 CECR2Q9BXF3 1484 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 PATE2Q6UY27 113 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 SBSPONQ8IVN8 264 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 LRRC18Q8N456 261 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 PSMF1Q92530 271 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 MALSU1Q96EH3 234 aa0.82□□□□□ -2.28
CLK1-213ENST00000492793 GPX7Q96SL4 187 aaPredicted RBP0.82□□□□□ -2.28
CLK1-213ENST00000492793 TRAV23DV6A0A075B6W5 121 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 HIST1H2BKO60814 126 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 PPYP01298 95 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 CSN2P05814 226 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 HIST1H2BJP06899 126 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 SPTBP11277 2137 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 GLRXP35754 106 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 TCTAP57738 103 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 VBP1P61758 197 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 EIF3IQ13347 325 aaKnown RBP0.81□□□□□ -2.28
CLK1-213ENST00000492793 C3orf33Q6P1S2 294 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 GRINAQ7Z429 371 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 ARPINQ7Z6K5 226 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 OR5AS1Q8N127 324 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 STX19Q8N4C7 294 aa0.81□□□□□ -2.28
CLK1-213ENST00000492793 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 TRAV27A0A087WT01 109 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 A0A096LPI6 279 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 hDV103S1A0JD37 113 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 LYRM1O43325 122 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 IGLV1-51P01701 117 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 IGLV3-1P01715 115 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 FABP1P07148 127 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
CLK1-213ENST00000492793 LTC4SQ16873 150 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 TRIQKQ629K1 86 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 TMEM14EPQ6UXP3 125 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 NUP35Q8NFH5 326 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 BIN3Q9NQY0 253 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 ASB4Q9Y574 426 aa0.8□□□□□ -2.28
CLK1-213ENST00000492793 COL1A1P02452 1464 aaPredicted RBP0.8□□□□□ -2.28
CLK1-213ENST00000492793 PHRF1Q9P1Y6 1649 aaKnown RBP0.79□□□□□ -2.28
CLK1-213ENST00000492793 TET1Q8NFU7 2136 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 PPP5D1E7EU14 171 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 JMJD7-PLA2G4BH0Y9G9 81 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 IDO1P14902 403 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 SERPINB1P30740 379 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 OR10AG1Q8NH19 301 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 PLEKHB2Q96CS7 222 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 ZC2HC1AQ96GY0 325 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 CARD19Q96LW7 228 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 TCEAL2Q9H3H9 227 aaPredicted RBP0.79□□□□□ -2.28
CLK1-213ENST00000492793 MED11Q9P086 117 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 PTPRDP23468 1912 aa0.79□□□□□ -2.28
CLK1-213ENST00000492793 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 A0A087WSZ3 146 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 C9orf170A2RU37 121 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 C5orf67F2Z3F1 127 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 GPR31O00270 319 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 SPATA45Q537H7 98 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 FKBP1CQ5VVH2 108 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 C1orf140Q5VVS0 124 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 KRTAP26-1Q6PEX3 210 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 STX12Q86Y82 276 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 FAM24BQ8N5W8 94 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 DYDC1Q8WWB3 177 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 PCBD2Q9H0N5 130 aa0.78□□□□□ -2.28
CLK1-213ENST00000492793 RNF11Q9Y3C5 154 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms