RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	TCTE3	Q8IZS6	198 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	IL17D	Q8TAD2	202 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	SLC50A1	Q9BRV3	221 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	HRH4	Q9H3N8	390 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	CLEC5A	Q9NY25	188 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	TNFSF18	Q9UNG2	199 aa		10.11	□□□□□ -0.79
PTPN7-215	ENST00000492451	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	TRAV8-2	A0A0B4J237	113 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451		A0A0J9YX75	114 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	HMSD	A8MTL9	139 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	IGLC2	P0DOY2	106 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	GDF5OS	Q5U4N7	250 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	FAM78B	Q5VT40	261 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	ZNF738	Q8NE65	137 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	C20orf173	Q96LM9	149 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	RARRES2	Q99969	163 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	MRPL32	Q9BYC8	188 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	MFF	Q9GZY8	342 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	TMEM14C	Q9P0S9	112 aa		10.1	□□□□□ -0.79
PTPN7-215	ENST00000492451	TRAV5	A0A0B4J249	113 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451		A0A0D9SG52	128 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	ARPC5	O15511	151 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	DUSP14	O95147	198 aa	Known RBP	10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	GIG44	P09565	113 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	C4BPB	P20851	252 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	ZNF345	Q14585	488 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	PSG3	Q16557	428 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451		Q5BKY6	102 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	GCSAML	Q5JQS6	135 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	CASC10	Q5T4H9	136 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	RNF182	Q8N6D2	247 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	OR4B1	Q8NGF8	309 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	OR11H2	Q8NH07	326 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	WFDC1	Q9HC57	220 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	STARD9	Q9P2P6	4700 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451	TENM2	Q9NT68	2774 aa		10.09	□□□□□ -0.79
PTPN7-215	ENST00000492451		F6UB75	175 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451		H3BQ15	152 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	ZNF253	O75346	499 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	IGKV3-20	P01619	116 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	DEFB1	P60022	68 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	PSG9	Q00887	426 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	FFAR4	Q5NUL3	377 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	IGFL4	Q6B9Z1	124 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	TIMM9	Q9Y5J7	89 aa		10.08	□□□□□ -0.8
PTPN7-215	ENST00000492451	JTB	O76095	146 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	HIST1H1E	P10412	219 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	RHOB	P62745	196 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	EIF5A	P63241	154 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	SAT2	Q96F10	170 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	ST6GAL2	Q96JF0	529 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	HYLS1	Q96M11	299 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	XCL2	Q9UBD3	114 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	FUT9	Q9Y231	359 aa		10.07	□□□□□ -0.8
PTPN7-215	ENST00000492451	TRBV19	A0A075B6N1	114 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451		A0A0J9YWU9	116 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	RNF222	A6NCQ9	220 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451		A8MTW9	85 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	C1QB	P02746	253 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	AMBP	P02760	352 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	SNRPC	P09234	159 aa	Known RBP	10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	PDE6H	Q13956	83 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	ZFAND6	Q6FIF0	208 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	MIR17HG	Q75NE6	70 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	CSNK1G2-AS1	Q8NCQ2	148 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	RPUSD4	Q96CM3	377 aa	Known RBP	10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	SLC25A2	Q9BXI2	301 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	ZNF586	Q9NXT0	402 aa		10.06	□□□□□ -0.8
PTPN7-215	ENST00000492451	CSMD3	Q7Z407	3707 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	KANTR	A0A1W2PQU2	76 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451		G3V3Q6	166 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	SMLR1	H3BR10	107 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451		H3BTX0	84 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	SLC17A3	O00476	420 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	PFDN1	O60925	122 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	MIF	P14174	115 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	HLA-DMB	P28068	263 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	CNN1	P51911	297 aa	Known RBP	10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	TAS2R45	P59539	299 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	KCNRG	Q8N5I3	272 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	OR8A1	Q8NGG7	326 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	FAM167A-AS1	Q96KT0	104 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	ARPC5L	Q9BPX5	153 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	PSMG3	Q9BT73	122 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	OR51M1	Q9H341	326 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	C11orf68	Q9H3H3	251 aa	Known RBP	10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	PRELID1	Q9Y255	219 aa		10.05	□□□□□ -0.8
PTPN7-215	ENST00000492451	MB	P02144	154 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	PYY	P10082	97 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	M6PR	P20645	277 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	SERF2	P84101	59 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	HIST1H1A	Q02539	215 aa	Predicted RBP	10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	ZFP69	Q49AA0	526 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	KHDC3L	Q587J8	217 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	HSD17B11	Q8NBQ5	300 aa		10.04	□□□□□ -0.8
PTPN7-215	ENST00000492451	OR10J6P	Q8NGY7	276 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms