RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZCCHC24Q8N2G6 241 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 C10orf126Q8N4M7 172 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 S4R3C0 116 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 TSPAN13O95857 204 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 PHLDA3Q9Y5J5 127 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 POLEQ07864 2286 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 TRBV25-1A0A075B6N4 114 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 PRR33A8MZF0 331 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 ATP5G2Q06055 141 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 JMJD8Q96S16 334 aa9.1□□□□□ -0.95
CRNKL1-204ENST00000490910 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 PATE3B3GLJ2 98 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 PVRIGQ6DKI7 326 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 C1orf162Q8NEQ5 155 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 NDUFA4L2Q9NRX3 87 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 ARFGEF3Q5TH69 2177 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 FAM167A-AS1Q96KT0 104 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 H7C1H1 209 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 ORMDL2Q53FV1 153 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 PCDH15Q96QU1 1955 aa9.09□□□□□ -0.95
CRNKL1-204ENST00000490910 TNFRSF6BO95407 300 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 NPYP01303 97 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 MBD6Q96DN6 1003 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 ZNF503Q96F45 646 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 TIMD4Q96H15 378 aa9.09□□□□□ -0.96
CRNKL1-204ENST00000490910 ZDBF2Q9HCK1 2354 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 IGHV3-35A0A0C4DH35 117 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 M0R381 172 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 POU2AF1Q16633 256 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 TMEM133Q9H2Q1 129 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 SPTA1P02549 2419 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 PRSS46E5RG02 174 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 SSBP2P81877 361 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 TCTEX1D4Q5JR98 221 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 FAM120AOSQ5T036 256 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 KLF12Q9Y4X4 402 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 IGKV1OR2-108A0A075B7D4 117 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 SPAG8Q99932 426 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-204ENST00000490910 NEGR1Q7Z3B1 354 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 PPP1R27Q86WC6 154 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 MRPL35Q9NZE8 188 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 EML6Q6ZMW3 1958 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE12JA6NER3 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 PCNX2A6NKB5 2137 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE7O76087 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 DKK1O94907 266 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 GAGE4Q13068 117 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 SVIPQ8NHG7 77 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 C1QTNF4Q9BXJ3 329 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 HIGD1BQ9P298 99 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 SRSF6Q13247 344 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 Q8TCH9 128 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 UBTD1Q9HAC8 227 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 PLSCR4Q9NRQ2 329 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 ZGRF1Q86YA3 2104 aa9.07□□□□□ -0.96
CRNKL1-204ENST00000490910 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 ATG2AQ2TAZ0 1938 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 C9JAW5 83 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 KLK10O43240 276 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 WT1-ASQ06250 92 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 C2orf91Q6ZV80 131 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 CACNA1HO95180 2353 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 Q0VFX4 171 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 Q8TAT8 98 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 SRSF8Q9BRL6 282 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 ZNRD1Q9P1U0 126 aa9.06□□□□□ -0.96
CRNKL1-204ENST00000490910 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 PRRG2O14669 202 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 SS18L1O75177 396 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 K7EMI3 77 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 PPP1R17O96001 155 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 KLRD1Q13241 179 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 PMS2CLQ68D20 193 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 PATE2Q6UY27 113 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 SMIM20Q8N5G0 67 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 Q8N7P7 452 aa9.05□□□□□ -0.96
CRNKL1-204ENST00000490910 C16orf92Q96LL3 132 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms