RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	NBEAP1	P0C6P0	100 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	IGLC2	P0DOY2	106 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	BMI1	P35226	326 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	GUK1	Q16774	197 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	GLMP	Q8WWB7	406 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	RHPN1-AS1	Q9BWJ2	59 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	ARL2-SNX15	V9GYD0	113 aa		13.74	□□□□□ -0.21
SRM-206	ENST00000490101	IGHV3OR16-13	A0A075B7E8	117 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	IGHV3-74	A0A0B4J1X5	117 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	IGHV3-66	A0A0C4DH42	116 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	LOC102723971	A0A1B0GUV8	181 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	C2orf70	A6NJV1	201 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	CHEK1	O14757	476 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	BCL2	P10415	239 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	HAGH	Q16775	308 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	ZNF506	Q5JVG8	444 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	SLC7A5P1	Q8MH63	180 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	PEMT	Q9UBM1	199 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101	SMAD5-AS1	Q9Y6J3	95 aa		13.73	□□□□□ -0.21
SRM-206	ENST00000490101		H3BQ15	152 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	PAGE4	O60829	102 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	CBLN1	P23435	193 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	GALR1	P47211	349 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	TOR2A	Q5JU69	321 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	OR9G4	Q8NGQ1	327 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	B9D2	Q9BPU9	175 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	ELOVL1	Q9BW60	279 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	ZNF586	Q9NXT0	402 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	VAX2	Q9UIW0	290 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101	RYR3	Q15413	4870 aa		13.72	□□□□□ -0.21
SRM-206	ENST00000490101		A0A087X0K7	114 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101		A0A1W2PRE2	83 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101	CD5	P06127	495 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101	UQCC3	Q6UW78	93 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101	TXNDC17	Q9BRA2	123 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101	EIF5A2	Q9GZV4	153 aa	Known RBP	13.71	□□□□□ -0.21
SRM-206	ENST00000490101	SMDT1	Q9H4I9	107 aa		13.71	□□□□□ -0.21
SRM-206	ENST00000490101	TRBV19	A0A075B6N1	114 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	FAM74A7	A6NL05	159 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	NDUFS6	O75380	124 aa	Known RBP	13.7	□□□□□ -0.22
SRM-206	ENST00000490101	FOLR2	P14207	255 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	ATF4	P18848	351 aa	Predicted RBP	13.7	□□□□□ -0.22
SRM-206	ENST00000490101	EDN2	P20800	178 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	MEOX2	P50222	304 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	UBE2G2	P60604	165 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	PDE6H	Q13956	83 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	ICAM4	Q14773	271 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	PEA15	Q15121	130 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	SIGLEC15	Q6ZMC9	328 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	ADAMTSL5	Q6ZMM2	481 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	C17orf77	Q96MU5	243 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	RARRES2	Q99969	163 aa		13.7	□□□□□ -0.22
SRM-206	ENST00000490101	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.7	□□□□□ -0.22
SRM-206	ENST00000490101	HELT	A6NFD8	242 aa		13.69	□□□□□ -0.22
SRM-206	ENST00000490101	OVOL1	O14753	267 aa		13.69	□□□□□ -0.22
SRM-206	ENST00000490101	CSN3	P07498	182 aa		13.69	□□□□□ -0.22
SRM-206	ENST00000490101	SRSF3	P84103	164 aa	Known RBP	13.69	□□□□□ -0.22
SRM-206	ENST00000490101	BLNK	Q8WV28	456 aa		13.69	□□□□□ -0.22
SRM-206	ENST00000490101	NKX6-2	Q9C056	277 aa	Predicted RBP	13.69	□□□□□ -0.22
SRM-206	ENST00000490101	ZNF785	A8K8V0	405 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	ZNF253	O75346	499 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	NDUFB4	O95168	129 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	SNRPC	P09234	159 aa	Known RBP	13.68	□□□□□ -0.22
SRM-206	ENST00000490101	MEF2B	Q02080	365 aa	Predicted RBP	13.68	□□□□□ -0.22
SRM-206	ENST00000490101	CST9LP1	Q5W188	147 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	FAM90A2P	Q658T7	463 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	LYPD1	Q8N2G4	141 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	RXFP4	Q8TDU9	374 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	SIGLEC8	Q9NYZ4	499 aa		13.68	□□□□□ -0.22
SRM-206	ENST00000490101	ZMAT5	Q9UDW3	170 aa	Known RBP	13.68	□□□□□ -0.22
SRM-206	ENST00000490101	C11orf94	C9JXX5	98 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101		H3BTX0	84 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	CD81	P60033	236 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	TCF24	Q7RTU0	167 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	CCDC28A	Q8IWP9	274 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	PRR25	Q96S07	402 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	STAB2	Q8WWQ8	2551 aa		13.67	□□□□□ -0.22
SRM-206	ENST00000490101	GGTLC3	B5MD39	225 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101	ATP5G3	P48201	142 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101	RAN	P62826	216 aa	Known RBP	13.66	□□□□□ -0.22
SRM-206	ENST00000490101	WWC2-AS2	Q96NR7	200 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101	TREM1	Q9NP99	234 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101	OTOR	Q9NRC9	128 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101	MLX	Q9UH92	298 aa		13.66	□□□□□ -0.22
SRM-206	ENST00000490101		C9JQL5	133 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101	SLC17A3	O00476	420 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101	SRP19	P09132	144 aa	Known RBP	13.65	□□□□□ -0.22
SRM-206	ENST00000490101	SUMO1	P63165	101 aa	Known RBP	13.65	□□□□□ -0.22
SRM-206	ENST00000490101	PSG9	Q00887	426 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101	C9orf66	Q5T8R8	295 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101	CITED4	Q96RK1	184 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101		Q9H3A6	140 aa		13.65	□□□□□ -0.22
SRM-206	ENST00000490101	TMEM250	H0YL14	139 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	PDE6D	O43924	150 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	TCEAL7	Q9BRU2	100 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	SLC50A1	Q9BRV3	221 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	SLC35B3	Q9H1N7	401 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	NRN1	Q9NPD7	142 aa		13.64	□□□□□ -0.23
SRM-206	ENST00000490101	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms