RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LRRC20Q8TCA0 184 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 NAA50Q9GZZ1 169 aaKnown RBP9.58□□□□□ -0.88
VARS-227ENST00000489979 HIGD1AQ9Y241 93 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 A0A087X0K7 114 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 RGS5O15539 181 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 KRTAP10-1P60331 282 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 RAP2BP61225 183 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 RPP30P78346 268 aaKnown RBP9.57□□□□□ -0.88
VARS-227ENST00000489979 CCDC28AQ8IWP9 274 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 RAB2BQ8WUD1 216 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
VARS-227ENST00000489979 BCL7BQ9BQE9 202 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 C20orf144Q9BQM9 153 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 PARD6GQ9BYG4 376 aaPredicted RBP9.57□□□□□ -0.88
VARS-227ENST00000489979 TMPRSS5Q9H3S3 457 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 MDFICQ9P1T7 246 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 SCP2D1Q9UJQ7 156 aa9.57□□□□□ -0.88
VARS-227ENST00000489979 DNAH8Q96JB1 4490 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 A0A096LPF7 62 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 SNURFLB1AK76 121 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 WRBO00258 174 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 SIVA1O15304 175 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 HYPMO75409 117 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 MED6O75586 246 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 SMR3BP02814 79 aaPredicted RBP9.56□□□□□ -0.88
VARS-227ENST00000489979 IL5P05113 134 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 TMBIM6P55061 237 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 CTF1Q16619 201 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 CYP2G1PQ6ZSU1 146 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 ACOT7LQ6ZUV0 252 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
VARS-227ENST00000489979 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
VARS-227ENST00000489979 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
VARS-227ENST00000489979 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 ANKRD20A5PA0PJZ0 165 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 CCDC160A6NGH7 325 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 CTDSP2O14595 271 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 SYNGR2O43760 224 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 IFNA5P01569 189 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 OR5G3P0C626 314 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 SPANXN5Q5MJ07 72 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 GFI1BQ5VTD9 330 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 C18orf15Q96N68 181 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 MCUBQ9NWR8 336 aa9.55□□□□□ -0.88
VARS-227ENST00000489979 SMCO3A2RU48 225 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 H3BP45 60 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 CTDSPLO15194 276 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 LINC00869P0C866 280 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 SLC25A6P12236 298 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 IL18Q14116 193 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 Q6ZTI0 123 aa9.54□□□□□ -0.88
VARS-227ENST00000489979 PIGBOS1A0A0B4J2F0 54 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 PMS2P5A8MQ11 134 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 J3KRW8 73 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 MRPS12O15235 138 aaKnown RBP9.53□□□□□ -0.88
VARS-227ENST00000489979 NXPH4O95158 308 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
VARS-227ENST00000489979 PLP1P60201 277 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 ICAM4Q14773 271 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 TMED4Q7Z7H5 227 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 CCDC190Q86UF4 302 aa9.53□□□□□ -0.88
VARS-227ENST00000489979 STRAPQ9Y3F4 350 aaKnown RBP9.53□□□□□ -0.88
VARS-227ENST00000489979 A0A087WTM6 91 aa9.52□□□□□ -0.89
VARS-227ENST00000489979 ANXA7P20073 488 aaKnown RBP9.52□□□□□ -0.89
VARS-227ENST00000489979 DAZ2Q13117 558 aaKnown RBP9.52□□□□□ -0.89
VARS-227ENST00000489979 PATE2Q6UY27 113 aa9.52□□□□□ -0.89
VARS-227ENST00000489979 DIRAS2Q96HU8 199 aa9.52□□□□□ -0.89
VARS-227ENST00000489979 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
VARS-227ENST00000489979 TRGV2A0A075B6R0 118 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 TRAV12-3A0A0B4J271 114 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 CXCL2P19875 107 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 HAMPP81172 84 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 LCN15Q6UWW0 184 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 S100A7AQ86SG5 101 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 LRTM2Q8N967 370 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 ARV1Q9H2C2 271 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 RABL2BQ9UNT1 228 aa9.51□□□□□ -0.89
VARS-227ENST00000489979 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 J3QL48 77 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 HOXB5P09067 269 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 VAMP1P23763 118 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 SELENOTP62341 195 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 TMEM128Q5BJH2 165 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 SLC50A1Q9BRV3 221 aa9.5□□□□□ -0.89
VARS-227ENST00000489979 CCDC59Q9P031 241 aaKnown RBP9.5□□□□□ -0.89
VARS-227ENST00000489979 RABL2AQ9UBK7 228 aaPredicted RBP9.5□□□□□ -0.89
VARS-227ENST00000489979 LINC00854A0A1B0GVQ3 168 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 H3BTX0 84 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 GCSHP23434 173 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 RRAS2P62070 204 aaPredicted RBP9.49□□□□□ -0.89
VARS-227ENST00000489979 SPCS2Q15005 226 aa9.49□□□□□ -0.89
VARS-227ENST00000489979 Q6ZSN1 163 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms