RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CXCL2P19875 107 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 CNN1P51911 297 aaKnown RBP6.61□□□□□ -1.35
HDAC6-232ENST00000489053 B2MP61769 119 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 ARL16Q0P5N6 197 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
HDAC6-232ENST00000489053 PSG3Q16557 428 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 RRN3P1Q2M238 152 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 IGFL4Q6B9Z1 124 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 RPUSD4Q96CM3 377 aaKnown RBP6.61□□□□□ -1.35
HDAC6-232ENST00000489053 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 SLC50A1Q9BRV3 221 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 PXMP4Q9Y6I8 212 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 X6R8D5 127 aa6.61□□□□□ -1.35
HDAC6-232ENST00000489053 A0A087X0K7 114 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 LOC102723971A0A1B0GUV8 181 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 IGSF23A1L1A6 192 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 BOLA2-SMG1P6H3BVE0 249 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 MPDU1O75352 247 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 SIX6O95475 246 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 CLINT1Q14677 625 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 SPINK13Q1W4C9 94 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 MIC13Q5XKP0 118 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 Q6ZTC4 211 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 IGF2BP2-AS1Q96M15 143 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 NEU1Q99519 415 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 NMES1Q9C002 83 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 SLC39A9Q9NUM3 307 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 WDR83OSQ9Y284 106 aa6.6□□□□□ -1.35
HDAC6-232ENST00000489053 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 C17orf112F2Z3M2 114 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 H3BTX0 84 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 M0R2Z0 102 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 SNRPCP09234 159 aaKnown RBP6.59□□□□□ -1.35
HDAC6-232ENST00000489053 ZNF705DP0CH99 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-232ENST00000489053 ZNF705BP0CI00 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-232ENST00000489053 HTN1P15515 57 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 HTN3P15516 51 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 CXCL3P19876 107 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 TSPOP30536 169 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 RPL29P47914 159 aaKnown RBP6.59□□□□□ -1.35
HDAC6-232ENST00000489053 OPCMLQ14982 345 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 GUK1Q16774 197 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 PATE2Q6UY27 113 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 ZNF705AQ6ZN79 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-232ENST00000489053 ZNF767PQ75MW2 155 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 OR11H7Q8NGC8 314 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 OR8A1Q8NGG7 326 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 OR5C1Q8NGR4 320 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 LINC01587Q99440 93 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
HDAC6-232ENST00000489053 TRAV8-2A0A0B4J237 113 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF705FA8MVS1 300 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-232ENST00000489053 IFNA5P01569 189 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 DAD1P61803 113 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 LGALS9CQ6DKI2 356 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 THAP6Q8TBB0 222 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 SCGB1C1Q8TD33 95 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 TMEM37Q8WXS4 190 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 RNF126Q9BV68 326 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 NPCDR1Q9BY65 106 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 CELA1Q9UNI1 258 aa6.58□□□□□ -1.36
HDAC6-232ENST00000489053 IGHV4-4A0A075B6R2 117 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 NHLH2Q02577 135 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 FAM222AQ5U5X8 452 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 CCDC28AQ8IWP9 274 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 BAP18Q8IXM2 172 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 TMEM256Q8N2U0 113 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 PPP1R1CQ8WVI7 109 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 NIPSNAP3BQ9BS92 247 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 MARVELD1Q9BSK0 173 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF331Q9NQX6 463 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-232ENST00000489053 YTHDF2Q9Y5A9 579 aaKnown RBP6.57□□□□□ -1.36
HDAC6-232ENST00000489053 AGRNO00468 2067 aa6.57□□□□□ -1.36
HDAC6-232ENST00000489053 TRAV5A0A0B4J249 113 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 ZNF705GA8MUZ8 300 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-232ENST00000489053 LEPP41159 167 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 CDKN1BP46527 198 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 PRR20EP86478 221 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 PRR20CP86479 221 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 PRR20DP86480 221 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 PRR20BP86481 221 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 PRR20AP86496 221 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 IFITM3Q01628 133 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 IL15RAQ13261 267 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 UBE2DNLQ8IWF7 75 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 BLNKQ8WV28 456 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 C17orf77Q96MU5 243 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 ATP5SQ99766 215 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 C11orf1Q9H5F2 150 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 OR5AC2Q9NZP5 309 aa6.56□□□□□ -1.36
HDAC6-232ENST00000489053 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
HDAC6-232ENST00000489053 H7BYZ3 331 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms