RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 LGALS7P47929 136 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 OR2B8PP59922 312 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 ELOBQ15370 118 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 ACOT6Q3I5F7 207 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM183AQ8IXX5 376 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 ZNF383Q8NA42 475 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 HSD17B11Q8NBQ5 300 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 OR2G3Q8NGZ4 309 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 RAB40CQ96S21 281 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 ATP5SQ99766 215 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 FAAP24Q9BTP7 215 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM222Q9H0R3 208 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 SLC2A9Q9NRM0 540 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 OR1A1Q9P1Q5 309 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 AK3Q9UIJ7 227 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
TMEM39A-209ENST00000486235 LOC102724200A0A096LPH7 203 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 A0A1B0GU03 582 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 C2orf70A6NJV1 201 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 TRDCB7Z8K6 153 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 TMEM250H0YL14 139 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 M0R1X1 148 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BKO60814 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 IGLV2-23P01705 113 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 MBP02144 154 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 APOA2P02652 100 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BJP06899 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BOP23527 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BBP33778 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 GPX4P36969 197 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 KIR2DS2P43631 304 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BDP58876 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BCP62807 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HBG1P69891 147 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HBG2P69892 147 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 RHOGP84095 191 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 ATP5G2Q06055 141 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 JOSD1Q15040 202 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST2H2BEQ16778 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 DEFB135Q30KP9 77 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 PYY3Q5JQD4 70 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 PRR27Q6MZM9 219 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 C6orf201Q7Z4U5 140 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 PDPNQ86YL7 162 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 CMTM1Q8IZ96 169 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST3H2BBQ8N257 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 MBD3L1Q8WWY6 194 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BHQ93079 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 ISOC2Q96AB3 205 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 FAM210BQ96KR6 192 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BNQ99877 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 HIST1H2BMQ99879 126 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 TIMM9Q9Y5J7 89 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 PUS1Q9Y606 427 aaKnown RBP eCLIP4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 VPS13DQ5THJ4 4388 aa4.78□□□□□ -1.64
TMEM39A-209ENST00000486235 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 C3orf85A0A1B0GTC6 90 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 FAM90A26D6RGX4 464 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 RHODO00212 210 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 NDUFB8O95169 186 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 CRYGBP07316 175 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 OR9G9P0C7N8 305 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 BCL2P10415 239 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 ATP6V0CP27449 155 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 NDUFA6P56556 154 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 RPL19P84098 196 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TNFRSF9Q07011 255 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TNXAQ16473 311 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 IQCJQ1A5X6 159 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 LGALS9CQ6DKI2 356 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 OR10D4PQ8NGN7 298 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 SCGB1C1Q8TD33 95 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 Q8WTZ3 238 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 PHLDA1Q8WV24 401 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 LSM10Q969L4 123 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TMEM18Q96B42 140 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 C14orf144Q96I85 54 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 PACRGQ96M98 296 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 PYGO2Q9BRQ0 406 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 HDHD3Q9BSH5 251 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 NDUFAF3Q9BU61 184 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TPPP3Q9BW30 176 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 C11orf1Q9H5F2 150 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 MANBALQ9NQG1 85 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 TECRQ9NZ01 308 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 NAT8Q9UHE5 227 aa4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 RCL1Q9Y2P8 373 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-209ENST00000486235 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 TRBV6-6A0A0A6YYG2 114 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
TMEM39A-209ENST00000486235 SRRM4A7MD48 611 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms