RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 KRTAP17-1Q9BYP8 105 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 TRAV6A0A075B6T7 132 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 K7EPK0 472 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 GOSR2O14653 212 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 AGPAT2O15120 278 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 LYRM1O43325 122 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 FCN2Q15485 313 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 FAM210BQ96KR6 192 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 SEC22CQ9BRL7 303 aa13.13□□□□□ -0.31
CLK1-211ENST00000481641 LSM5Q9Y4Y9 91 aaKnown RBP13.13□□□□□ -0.31
CLK1-211ENST00000481641 H3BTX0 84 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 RTL8CO15255 209 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 LINC00336Q6ZUF6 198 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 MGST2Q99735 147 aa13.12□□□□□ -0.31
CLK1-211ENST00000481641 A0A1B0GVY2 172 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 PLAC8L1A1L4L8 177 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 L7N2F9 121 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 TCRBP04435 133 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 VAMP2P63027 116 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 CNPY1Q3B7I2 92 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 ZNF546Q86UE3 836 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 TMEM37Q8WXS4 190 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
CLK1-211ENST00000481641 LINC01587Q99440 93 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 KIAA1109Q2LD37 5005 aa13.11□□□□□ -0.31
CLK1-211ENST00000481641 NACAE9PAV3 2078 aa13.1□□□□□ -0.31
CLK1-211ENST00000481641 HTN1P15515 57 aa13.1□□□□□ -0.31
CLK1-211ENST00000481641 BCAP31P51572 246 aa13.1□□□□□ -0.31
CLK1-211ENST00000481641 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
CLK1-211ENST00000481641 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
CLK1-211ENST00000481641 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
CLK1-211ENST00000481641 PKHD1P08F94 4074 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 C5orf51A6NDU8 294 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 FAM24AA6NFZ4 105 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 PRSS29PA6NIE9 313 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 SLC17A3O00476 420 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 COX7A2P2O60397 106 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 CST7O76096 145 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 KIR3DS1Q14943 382 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 LGALS9BQ3B8N2 356 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 PXDC1Q5TGL8 231 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
CLK1-211ENST00000481641 GGACTQ9BVM4 153 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
CLK1-211ENST00000481641 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
CLK1-211ENST00000481641 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 TSPOP30536 169 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 CAV2P51636 162 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 B2MP61769 119 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 OPCMLQ14982 345 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 MIC13Q5XKP0 118 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 C11orf1Q9H5F2 150 aa13.08□□□□□ -0.32
CLK1-211ENST00000481641 PKD1P98161 4303 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 TRAV5A0A0B4J249 113 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 CAMLGP49069 296 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 C10orf113Q5VZT2 155 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 LCN15Q6UWW0 184 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 Q6ZR54 194 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
CLK1-211ENST00000481641 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
CLK1-211ENST00000481641 DYNC1H1Q14204 4646 aaKnown RBP13.07□□□□□ -0.32
CLK1-211ENST00000481641 H3BQ15 152 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 CXCL2P19875 107 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 CDKN1BP46527 198 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 TAS2R60P59551 318 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 RNF212Q495C1 297 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 C2orf50Q96LR7 162 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 RNF24Q9Y225 148 aa13.06□□□□□ -0.32
CLK1-211ENST00000481641 F5H768 121 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 H2AFB2P0C5Z0 115 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 IGLC2P0DOY2 106 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 S100A10P60903 97 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 DNAJC4Q9NNZ3 241 aa13.05□□□□□ -0.32
CLK1-211ENST00000481641 DNAH11Q96DT5 4516 aa13.04□□□□□ -0.32
CLK1-211ENST00000481641 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
CLK1-211ENST00000481641 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
CLK1-211ENST00000481641 SAT2Q96F10 170 aaPredicted RBP13.04□□□□□ -0.32
CLK1-211ENST00000481641 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
CLK1-211ENST00000481641 WDR83OSQ9Y284 106 aa13.04□□□□□ -0.32
CLK1-211ENST00000481641 UBE2L5PA0A1B0GUS4 154 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 J3KRW8 73 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 RAB31Q13636 194 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 RAB32Q13637 225 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 Q6ZRG5 221 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
CLK1-211ENST00000481641 NOP10Q9NPE3 64 aaKnown RBP13.03□□□□□ -0.32
CLK1-211ENST00000481641 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms