RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-207ENST00000481281 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
HDAC1-207ENST00000481281 SLC35B3Q9H1N7 401 aa9.42□□□□□ -0.9
HDAC1-207ENST00000481281 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
HDAC1-207ENST00000481281 LYSTQ99698 3801 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 SSNA1O43805 119 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 MPDU1O75352 247 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 FGF7P21781 194 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
HDAC1-207ENST00000481281 FXYD7P58549 80 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 BPIFA4PQ86YQ2 179 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 PFDN5Q99471 154 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 NEU1Q99519 415 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 SLC25A31Q9H0C2 315 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 DNAJC4Q9NNZ3 241 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 KLK5Q9Y337 293 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-207ENST00000481281 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
HDAC1-207ENST00000481281 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.9
HDAC1-207ENST00000481281 PTTG1O95997 202 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 HLA-DMBP28068 263 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 B2MP61769 119 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-207ENST00000481281 PXMP4Q9Y6I8 212 aa9.4□□□□□ -0.9
HDAC1-207ENST00000481281 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 MPC2O95563 127 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 PSG3Q16557 428 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 OR11H7Q8NGC8 314 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
HDAC1-207ENST00000481281 H3BQ15 152 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 SLC17A3O00476 420 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 PET100P0DJ07 73 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 C1orf158Q8N1D5 194 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 THAP6Q8TBB0 222 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 IGF2BP2-AS1Q96M15 143 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 ALG5Q9Y673 324 aa9.38□□□□□ -0.91
HDAC1-207ENST00000481281 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-207ENST00000481281 AMBPP02760 352 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
HDAC1-207ENST00000481281 CLINT1Q14677 625 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 GUK1Q16774 197 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
HDAC1-207ENST00000481281 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-207ENST00000481281 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
HDAC1-207ENST00000481281 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
HDAC1-207ENST00000481281 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 H3BTX0 84 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 M0R2Z0 102 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 ZNF253O75346 499 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-207ENST00000481281 SPINK13Q1W4C9 94 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 Q6ZTC4 211 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 ATP5SQ99766 215 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 KCNIP2Q9NS61 270 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 MBD2Q9UBB5 411 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
HDAC1-207ENST00000481281 PLECQ15149 4684 aaKnown RBP9.35□□□□□ -0.91
HDAC1-207ENST00000481281 INSP01308 110 aa9.35□□□□□ -0.91
HDAC1-207ENST00000481281 RPL12P30050 165 aaKnown RBP9.35□□□□□ -0.91
HDAC1-207ENST00000481281 C2CD4CQ8TF44 421 aa9.35□□□□□ -0.91
HDAC1-207ENST00000481281 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
HDAC1-207ENST00000481281 ALMS1Q8TCU4 4167 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 HBE1P02100 147 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 TCTAP57738 103 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 BAP18Q8IXM2 172 aa9.34□□□□□ -0.91
HDAC1-207ENST00000481281 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 TRBV19A0A075B6N1 114 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 PRAC2D3DTV9 90 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 NDUFB4O95168 129 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 LY6G6CO95867 125 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
HDAC1-207ENST00000481281 HIST1H1EP10412 219 aaKnown RBP9.33□□□□□ -0.92
HDAC1-207ENST00000481281 RHOBP62745 196 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 PDE6HQ13956 83 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 FAM167A-AS1Q96KT0 104 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 TMEM208Q9BTX3 173 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
HDAC1-207ENST00000481281 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
HDAC1-207ENST00000481281 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
HDAC1-207ENST00000481281 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms