RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 VBP1P61758 197 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 RPP30P78346 268 aaKnown RBP11.01□□□□□ -0.65
DDX56-210ENST00000479440 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
DDX56-210ENST00000479440 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 LYZL2Q7Z4W2 148 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 PRRT1Q99946 306 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 NXPH4O95158 308 aa11□□□□□ -0.65
DDX56-210ENST00000479440 AKAIN1P0CW23 69 aa11□□□□□ -0.65
DDX56-210ENST00000479440 GCSHP23434 173 aa11□□□□□ -0.65
DDX56-210ENST00000479440 S100A7AQ86SG5 101 aa11□□□□□ -0.65
DDX56-210ENST00000479440 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
DDX56-210ENST00000479440 CIB3Q96Q77 187 aaPredicted RBP11□□□□□ -0.65
DDX56-210ENST00000479440 HIGD1AQ9Y241 93 aa11□□□□□ -0.65
DDX56-210ENST00000479440 MED6O75586 246 aa10.99□□□□□ -0.65
DDX56-210ENST00000479440 CXCL2P19875 107 aa10.99□□□□□ -0.65
DDX56-210ENST00000479440 SCGB3A2Q96PL1 93 aa10.99□□□□□ -0.65
DDX56-210ENST00000479440 ICOSQ9Y6W8 199 aa10.99□□□□□ -0.65
DDX56-210ENST00000479440 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 DUXBA0A1W2PPF3 345 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
DDX56-210ENST00000479440 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 TMEM182Q6ZP80 229 aaPredicted RBP10.98□□□□□ -0.65
DDX56-210ENST00000479440 TMED4Q7Z7H5 227 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 CCDC190Q86UF4 302 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 FUNDC2Q9BWH2 189 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 RNF24Q9Y225 148 aa10.98□□□□□ -0.65
DDX56-210ENST00000479440 TRAV9-2A0A087WT02 112 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 A0A087WXM4 84 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 PRSS46E5RG02 174 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 ATP6V1G2O95670 118 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 CYP2G1PQ6ZSU1 146 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 ACOT7LQ6ZUV0 252 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 OR51S1Q8NGJ8 323 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 SCP2D1Q9UJQ7 156 aa10.97□□□□□ -0.65
DDX56-210ENST00000479440 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.65
DDX56-210ENST00000479440 PITX3O75364 302 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 HYPMO75409 117 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 IL5P05113 134 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 OR5G3P0C626 314 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 LCN15Q6UWW0 184 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 Q6ZTI0 123 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 CLVS1Q8IUQ0 354 aaPredicted RBP10.96□□□□□ -0.65
DDX56-210ENST00000479440 SMIM4Q8WVI0 70 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 PYGO2Q9BRQ0 406 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 SLC50A1Q9BRV3 221 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
DDX56-210ENST00000479440 SMCO3A2RU48 225 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 LINC00869P0C866 280 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 HAMPP81172 84 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 ZNF680Q8NEM1 530 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 LINC00467Q9BRT7 94 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 PARD6GQ9BYG4 376 aaPredicted RBP10.95□□□□□ -0.66
DDX56-210ENST00000479440 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
DDX56-210ENST00000479440 NPIPB6E9PJ23 425 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 K7EP13 123 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
DDX56-210ENST00000479440 SLC25A6P12236 298 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 LEPP41159 167 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 PLP1P60201 277 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 SELENOTP62341 195 aa10.94□□□□□ -0.66
DDX56-210ENST00000479440 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
DDX56-210ENST00000479440 WRBO00258 174 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 PAX4O43316 350 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 SYNGR2O43760 224 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 ANXA7P20073 488 aaKnown RBP10.93□□□□□ -0.66
DDX56-210ENST00000479440 SPANXN5Q5MJ07 72 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 SYT8Q8NBV8 401 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 ODF3Q96PU9 254 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 MSRB1Q9NZV6 116 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
DDX56-210ENST00000479440 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
DDX56-210ENST00000479440 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
DDX56-210ENST00000479440 TRGV1A0A0A0MS02 117 aa10.92□□□□□ -0.66
DDX56-210ENST00000479440 KRTAP29-1A8MX34 341 aaPredicted RBP10.92□□□□□ -0.66
DDX56-210ENST00000479440 H3BP45 60 aa10.92□□□□□ -0.66
DDX56-210ENST00000479440 J3KRW8 73 aa10.92□□□□□ -0.66
DDX56-210ENST00000479440 SERTAD4-AS1Q5TG53 156 aa10.92□□□□□ -0.66
DDX56-210ENST00000479440 NTN5Q8WTR8 489 aaPredicted RBP10.92□□□□□ -0.66
DDX56-210ENST00000479440 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 CTDSPLO15194 276 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 MRPS12O15235 138 aaKnown RBP10.91□□□□□ -0.66
DDX56-210ENST00000479440 RGS5O15539 181 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 ZNF324O75467 553 aaPredicted RBP10.91□□□□□ -0.66
DDX56-210ENST00000479440 ARV1Q9H2C2 271 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 MCUBQ9NWR8 336 aa10.91□□□□□ -0.66
DDX56-210ENST00000479440 ANKRD20A5PA0PJZ0 165 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 PLA2G1BP04054 148 aaKnown RBP10.9□□□□□ -0.66
DDX56-210ENST00000479440 EVI2AP22794 236 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 SLAQ13239 276 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 ARL6Q9H0F7 186 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
DDX56-210ENST00000479440 PRO0255Q9UI72 69 aa10.9□□□□□ -0.66
DDX56-210ENST00000479440 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms