RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 APOC4P55056 127 aa19.73■□□□□ 0.75
CCM2-211ENST00000478582 RHOBP62745 196 aa19.73■□□□□ 0.75
CCM2-211ENST00000478582 ARPC5LQ9BPX5 153 aa19.73■□□□□ 0.75
CCM2-211ENST00000478582 KNCNA6PVL3 124 aa19.72■□□□□ 0.75
CCM2-211ENST00000478582 C1QBP02746 253 aa19.72■□□□□ 0.75
CCM2-211ENST00000478582 STHQ8IWL8 128 aa19.72■□□□□ 0.75
CCM2-211ENST00000478582 C20orf173Q96LM9 149 aa19.72■□□□□ 0.75
CCM2-211ENST00000478582 SLC50A1Q9BRV3 221 aa19.72■□□□□ 0.75
CCM2-211ENST00000478582 HIST1H1EP10412 219 aaKnown RBP19.71■□□□□ 0.75
CCM2-211ENST00000478582 RPL35AP18077 110 aaKnown RBP19.71■□□□□ 0.75
CCM2-211ENST00000478582 ACTL10Q5JWF8 245 aa19.71■□□□□ 0.75
CCM2-211ENST00000478582 TRPT1Q86TN4 253 aaKnown RBP19.71■□□□□ 0.75
CCM2-211ENST00000478582 LRRC20Q8TCA0 184 aa19.71■□□□□ 0.75
CCM2-211ENST00000478582 SAT2Q96F10 170 aaPredicted RBP19.71■□□□□ 0.75
CCM2-211ENST00000478582 ZNF331Q9NQX6 463 aaPredicted RBP19.71■□□□□ 0.75
CCM2-211ENST00000478582 RPRMQ9NS64 109 aa19.71■□□□□ 0.75
CCM2-211ENST00000478582 UBE2CO00762 179 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 ZNF253O75346 499 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 MBP02144 154 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 FOXI2Q6ZQN5 318 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 SH3BGRL3Q9H299 93 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 SAV1Q9H4B6 383 aaPredicted RBP19.7■□□□□ 0.74
CCM2-211ENST00000478582 ZNF586Q9NXT0 402 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 TENM3Q9P273 2699 aa19.7■□□□□ 0.74
CCM2-211ENST00000478582 RAB2AP61019 212 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 OR10G4Q8NGN3 311 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 OR10G9Q8NGN4 311 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 OR10G7Q8NGN6 311 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 SPATA25Q9BR10 227 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 OR51M1Q9H341 326 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 CLEC5AQ9NY25 188 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 STAB2Q8WWQ8 2551 aa19.69■□□□□ 0.74
CCM2-211ENST00000478582 TRBV19A0A075B6N1 114 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 H3BMM0 161 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 SNRPCP09234 159 aaKnown RBP19.68■□□□□ 0.74
CCM2-211ENST00000478582 PYYP10082 97 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 HLA-DRB4P13762 266 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 TAS2R45P59539 299 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 IGFL4Q6B9Z1 124 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 RNF182Q8N6D2 247 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 HYLS1Q96M11 299 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 CSTL1Q9H114 145 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 HLA-DRB4X5D2U9 266 aa19.68■□□□□ 0.74
CCM2-211ENST00000478582 KANTRA0A1W2PQU2 76 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 BCL2L11O43521 198 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 PDE6HQ13956 83 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 PSG3Q16557 428 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 TMUB2Q71RG4 321 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 CLUHP3Q96NS8 147 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 PAXXQ9BUH6 204 aa19.67■□□□□ 0.74
CCM2-211ENST00000478582 A0A1W2PPV4 95 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 H3BTX0 84 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 SLC17A3O00476 420 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 KHDC3LQ587J8 217 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 GDF5OSQ5U4N7 250 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 Q6ZWC4 215 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 RPP25LQ8N5L8 163 aaKnown RBP19.66■□□□□ 0.74
CCM2-211ENST00000478582 ZNF503Q96F45 646 aa19.66■□□□□ 0.74
CCM2-211ENST00000478582 A0A0J9YX75 114 aa19.65■□□□□ 0.74
CCM2-211ENST00000478582 DEFB1P60022 68 aa19.65■□□□□ 0.74
CCM2-211ENST00000478582 LGALSLQ3ZCW2 172 aaPredicted RBP19.65■□□□□ 0.74
CCM2-211ENST00000478582 EBLN2Q6P2I7 272 aa19.65■□□□□ 0.74
CCM2-211ENST00000478582 MORN3Q6PF18 240 aaPredicted RBP19.65■□□□□ 0.74
CCM2-211ENST00000478582 RNF141Q8WVD5 230 aa19.65■□□□□ 0.74
CCM2-211ENST00000478582 FXYD5Q96DB9 178 aa19.65■□□□□ 0.74
CCM2-211ENST00000478582 C3orf84H3BNL1 204 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 OR7C2O60412 319 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 NBEAP1P0C6P0 100 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 SPP1P10451 314 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 HLA-DMBP28068 263 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 TMEM41BQ5BJD5 291 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 FAM122CQ6P4D5 195 aa19.64■□□□□ 0.73
CCM2-211ENST00000478582 NDUFB4O95168 129 aa19.63■□□□□ 0.73
CCM2-211ENST00000478582 CD300CQ08708 224 aa19.63■□□□□ 0.73
CCM2-211ENST00000478582 ZNF738Q8NE65 137 aa19.63■□□□□ 0.73
CCM2-211ENST00000478582 TP53TG1Q9Y2A0 90 aa19.63■□□□□ 0.73
CCM2-211ENST00000478582 F6UB75 175 aa19.62■□□□□ 0.73
CCM2-211ENST00000478582 PFDN1O60925 122 aa19.62■□□□□ 0.73
CCM2-211ENST00000478582 CDC34P49427 236 aaPredicted RBP19.62■□□□□ 0.73
CCM2-211ENST00000478582 PSG9Q00887 426 aa19.62■□□□□ 0.73
CCM2-211ENST00000478582 PQLC2Q6ZP29 291 aa19.62■□□□□ 0.73
CCM2-211ENST00000478582 MUC7Q8TAX7 377 aa19.62■□□□□ 0.73
CCM2-211ENST00000478582 ZNF471Q9BX82 626 aaPredicted RBP19.62■□□□□ 0.73
CCM2-211ENST00000478582 A8MTW9 85 aa19.61■□□□□ 0.73
CCM2-211ENST00000478582 OR10J4P0C629 311 aa19.61■□□□□ 0.73
CCM2-211ENST00000478582 EIF5AP63241 154 aaKnown RBP19.61■□□□□ 0.73
CCM2-211ENST00000478582 RAB24Q969Q5 203 aa19.61■□□□□ 0.73
CCM2-211ENST00000478582 ACTR3CQ9C0K3 210 aaPredicted RBP19.61■□□□□ 0.73
CCM2-211ENST00000478582 DUSP14O95147 198 aaKnown RBP19.6■□□□□ 0.73
CCM2-211ENST00000478582 GIG44P09565 113 aaPredicted RBP19.6■□□□□ 0.73
CCM2-211ENST00000478582 STAG3L2P0CL84 134 aa19.6■□□□□ 0.73
CCM2-211ENST00000478582 STAG3L3P0CL85 134 aa19.6■□□□□ 0.73
CCM2-211ENST00000478582 NUTF2P61970 127 aaKnown RBP19.6■□□□□ 0.73
CCM2-211ENST00000478582 BLNKQ8WV28 456 aa19.6■□□□□ 0.73
CCM2-211ENST00000478582 RPUSD4Q96CM3 377 aaKnown RBP19.6■□□□□ 0.73
CCM2-211ENST00000478582 MRPL53Q96EL3 112 aaKnown RBP19.6■□□□□ 0.73
CCM2-211ENST00000478582 OVOL2Q9BRP0 275 aa19.6■□□□□ 0.73
CCM2-211ENST00000478582 AGRNO00468 2067 aa19.6■□□□□ 0.73
CCM2-211ENST00000478582 CA1P00915 261 aaPredicted RBP19.59■□□□□ 0.73
CCM2-211ENST00000478582 SEC11BP0C7V7 166 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms