RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 FAM110AQ9BQ89 295 aa7.67□□□□□ -1.18
CASC3-204ENST00000474190 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
CASC3-204ENST00000474190 OR10J4P0C629 311 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 ZNF688P0C7X2 276 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 HIST1H1EP10412 219 aaKnown RBP7.66□□□□□ -1.18
CASC3-204ENST00000474190 GALR1P47211 349 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 CDC34P49427 236 aaPredicted RBP7.66□□□□□ -1.18
CASC3-204ENST00000474190 RHOBP62745 196 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 BPIFA4PQ86YQ2 179 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 DEFB125Q8N687 156 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 RNF182Q8N6D2 247 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 RNF141Q8WVD5 230 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 MBD3L1Q8WWY6 194 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 PHYHIPLQ96FC7 376 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 NARS2Q96I59 477 aaKnown RBP7.66□□□□□ -1.18
CASC3-204ENST00000474190 OR51M1Q9H341 326 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 UBQLN2Q9UHD9 624 aa7.66□□□□□ -1.18
CASC3-204ENST00000474190 TENM3Q9P273 2699 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 RBMY1BA6NDE4 496 aaKnown RBP7.65□□□□□ -1.18
CASC3-204ENST00000474190 RBMY1EA6NEQ0 496 aaKnown RBP7.65□□□□□ -1.18
CASC3-204ENST00000474190 OR4C46A6NHA9 309 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 A8MZ25 164 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 PRAC2D3DTV9 90 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 MBP02144 154 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 GIG44P09565 113 aaPredicted RBP7.65□□□□□ -1.18
CASC3-204ENST00000474190 RBMY1DP0C7P1 496 aaKnown RBP7.65□□□□□ -1.18
CASC3-204ENST00000474190 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 SULT1A2P50226 295 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 DEFB131AP59861 70 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 CD81P60033 236 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
CASC3-204ENST00000474190 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 PAXXQ9BUH6 204 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 TMPRSS5Q9H3S3 457 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 PFDN2Q9UHV9 154 aa7.65□□□□□ -1.18
CASC3-204ENST00000474190 CTXND1A0A1B0GTU2 59 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 A8MTW9 85 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 UMAD1C9J7I0 102 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 F6UB75 175 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 ISLRO14498 428 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 ZNF253O75346 499 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 NBEAP1P0C6P0 100 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 IGHV4-30-4P0DP06 118 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 GCHFRP30047 84 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 PSMB3P49720 205 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
CASC3-204ENST00000474190 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
CASC3-204ENST00000474190 CCL20P78556 96 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 IFITM2Q01629 132 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 AKR1C8PQ5T2L2 129 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 ALKAL2Q6UX46 152 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 ACTR3CQ9C0K3 210 aaPredicted RBP7.64□□□□□ -1.19
CASC3-204ENST00000474190 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
CASC3-204ENST00000474190 TRAV1-1A0A0B4J248 108 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 KNCNA6PVL3 124 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 ZNF705FA8MVS1 300 aaPredicted RBP7.63□□□□□ -1.19
CASC3-204ENST00000474190 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 M0R3E3 92 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 DNASE2O00115 360 aaPredicted RBP7.63□□□□□ -1.19
CASC3-204ENST00000474190 PDE6HQ13956 83 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 PSMG4Q5JS54 123 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 LCN15Q6UWW0 184 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 S100A7AQ86SG5 101 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 LYPD6BQ8NI32 183 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 FAM213BQ8TBF2 198 aa7.63□□□□□ -1.19
CASC3-204ENST00000474190 YTHDF2Q9Y5A9 579 aaKnown RBP7.63□□□□□ -1.19
CASC3-204ENST00000474190 DNAH7Q8WXX0 4024 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 A0A1W2PPV4 95 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 GGTLC3B5MD39 225 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 H3BMM0 161 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 OR7C2O60412 319 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
CASC3-204ENST00000474190 S100A7P31151 101 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 MEOX2P50222 304 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 TAS2R45P59539 299 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 UBE2L3P68036 154 aaKnown RBP7.62□□□□□ -1.19
CASC3-204ENST00000474190 PAFAH1B2P68402 229 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 PSG3Q16557 428 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 GUK1Q16774 197 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 AMTNQ6UX39 209 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 DPPA3Q6W0C5 159 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 TRPT1Q86TN4 253 aaKnown RBP7.62□□□□□ -1.19
CASC3-204ENST00000474190 BLNKQ8WV28 456 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 C16orf92Q96LL3 132 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 MAP1LC3BQ9GZQ8 125 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 RNF24Q9Y225 148 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 EPPK1P58107 5090 aaKnown RBP7.62□□□□□ -1.19
CASC3-204ENST00000474190 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
CASC3-204ENST00000474190 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 A0A0J9YX75 114 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 CXorf1O96002 111 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 ZNF705DP0CH99 300 aaPredicted RBP7.61□□□□□ -1.19
CASC3-204ENST00000474190 ZNF705BP0CI00 300 aaPredicted RBP7.61□□□□□ -1.19
CASC3-204ENST00000474190 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
CASC3-204ENST00000474190 GTSCR1Q86UQ5 136 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms