RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 ZNF738Q8NE65 137 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 OR10G4Q8NGN3 311 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 OR10G9Q8NGN4 311 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 OR10G7Q8NGN6 311 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 GNPNAT1Q96EK6 184 aaPredicted RBP9.15□□□□□ -0.94
DDX56-209ENST00000473924 RCHY1Q96PM5 261 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 ARPC5LQ9BPX5 153 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 SLC50A1Q9BRV3 221 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 SLC25A2Q9BXI2 301 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 U3KQK5 164 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 A0A0D9SG52 128 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 H3BQ15 152 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 OR7C2O60412 319 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 CA1P00915 261 aaPredicted RBP9.14□□□□□ -0.95
DDX56-209ENST00000473924 MBP02144 154 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 PYYP10082 97 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 HLA-DRB4P13762 266 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 TAS2R45P59539 299 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 DEFB1P60022 68 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 RAB2AP61019 212 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 SERF2P84101 59 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 FAM122CQ6P4D5 195 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
DDX56-209ENST00000473924 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 SH3BGRL3Q9H299 93 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 SAV1Q9H4B6 383 aaPredicted RBP9.14□□□□□ -0.95
DDX56-209ENST00000473924 RETNQ9HD89 108 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 ZNF331Q9NQX6 463 aaPredicted RBP9.14□□□□□ -0.95
DDX56-209ENST00000473924 HLA-DRB4X5D2U9 266 aa9.14□□□□□ -0.95
DDX56-209ENST00000473924 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 F6UB75 175 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 H3BMM0 161 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 PFDN1O60925 122 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 IGKV3-20P01619 116 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 OR10J4P0C629 311 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 HIST1H1EP10412 219 aaKnown RBP9.13□□□□□ -0.95
DDX56-209ENST00000473924 SPP1P10451 314 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 HLA-DMBP28068 263 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 NUTF2P61970 127 aaKnown RBP9.13□□□□□ -0.95
DDX56-209ENST00000473924 PSG3Q16557 428 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 MORN3Q6PF18 240 aaPredicted RBP9.13□□□□□ -0.95
DDX56-209ENST00000473924 Q6ZWC4 215 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 BLNKQ8WV28 456 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 FAM167A-AS1Q96KT0 104 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 ZNF586Q9NXT0 402 aa9.13□□□□□ -0.95
DDX56-209ENST00000473924 TRBV19A0A075B6N1 114 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 A0A0J9YX75 114 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 SLC17A3O00476 420 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 SAT2Q96F10 170 aaPredicted RBP9.12□□□□□ -0.95
DDX56-209ENST00000473924 ZNF471Q9BX82 626 aaPredicted RBP9.12□□□□□ -0.95
DDX56-209ENST00000473924 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 CLEC5AQ9NY25 188 aa9.12□□□□□ -0.95
DDX56-209ENST00000473924 A0A1B0GVG6 124 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 BCL2L11O43521 198 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 SPRY2O43597 315 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 ZNF253O75346 499 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 DUSP14O95147 198 aaKnown RBP9.11□□□□□ -0.95
DDX56-209ENST00000473924 C1QBP02746 253 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
DDX56-209ENST00000473924 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
DDX56-209ENST00000473924 PSG9Q00887 426 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 PDE6HQ13956 83 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 TMEM41BQ5BJD5 291 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
DDX56-209ENST00000473924 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 AGRNO00468 2067 aa9.11□□□□□ -0.95
DDX56-209ENST00000473924 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX56-209ENST00000473924 ZNF705DP0CH99 300 aaPredicted RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 ZNF705BP0CI00 300 aaPredicted RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 EIF5AP63241 154 aaKnown RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 TMUB2Q71RG4 321 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 RNF183Q96D59 192 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 FXYD5Q96DB9 178 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 HYLS1Q96M11 299 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
DDX56-209ENST00000473924 PPP1R14DQ9NXH3 145 aa9.1□□□□□ -0.95
DDX56-209ENST00000473924 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
DDX56-209ENST00000473924 NDUFB4O95168 129 aa9.09□□□□□ -0.95
DDX56-209ENST00000473924 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms