RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 IGHV3-53P01767 116 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 FHL2Q14192 279 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 STEAP1BQ6NZ63 245 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
SSBP1-209ENST00000473783 ZNF486Q96H40 463 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-209ENST00000473783 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 TXNDC17Q9BRA2 123 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 U3KQ87 197 aa6.87□□□□□ -1.31
SSBP1-209ENST00000473783 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 C3orf85A0A1B0GTC6 90 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 RBFOX3A6NFN3 312 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 E5RGE8 158 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 LECT2O14960 151 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 ORM1P02763 201 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 PGAM2P15259 253 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 GPX4P36969 197 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-209ENST00000473783 GGNBP1Q5YKI7 109 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 PRSS48Q7RTY5 328 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 CCDC190Q86UF4 302 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 LYSMD2Q8IV50 215 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 CACNG5Q9UF02 275 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 CACFD1Q9UGQ2 172 aa6.86□□□□□ -1.31
SSBP1-209ENST00000473783 TRAV12-3A0A0B4J271 114 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 RPL7P18124 248 aaKnown RBP6.85□□□□□ -1.31
SSBP1-209ENST00000473783 HLA-DMAP28067 261 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 RCVRNP35243 200 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 TCL1AP56279 114 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 PIGPP57054 158 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 TIRAPP58753 221 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 GPR107Q5VW38 600 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 TMEM147Q9BVK8 224 aa6.85□□□□□ -1.31
SSBP1-209ENST00000473783 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-209ENST00000473783 IGKV1OR2-108A0A075B7D4 117 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 A0A087X0K7 114 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 B3GALNT1O75752 331 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-209ENST00000473783 ANXA2RQ3ZCQ2 193 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 THAP8Q8NA92 274 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 ZBTB8BQ8NAP8 495 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-209ENST00000473783 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 BLNKQ8WV28 456 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
SSBP1-209ENST00000473783 TXNL4BQ9NX01 149 aaKnown RBP6.84□□□□□ -1.31
SSBP1-209ENST00000473783 TRGV4A0A0C4DH28 118 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 C9JCJ5 164 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 CCNKO75909 580 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 ORM2P19652 201 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 PI3P19957 117 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 LEPP41159 167 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 ATP5IP56385 69 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-209ENST00000473783 ZNF846Q147U1 533 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 SP6Q3SY56 376 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 IBA57Q5T440 356 aaKnown RBP6.83□□□□□ -1.32
SSBP1-209ENST00000473783 C9orf47Q6ZRZ4 202 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 IQCF2Q8IXL9 164 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 LGI3Q8N145 548 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 Q8N976 141 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 BPIFCQ8NFQ6 507 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 KLF12Q9Y4X4 402 aa6.83□□□□□ -1.32
SSBP1-209ENST00000473783 TRAV8-6A0A0B4J262 113 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 H3BRN7 92 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 J3KRW8 73 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 CDS2O95674 445 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 PRSS3P35030 304 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 EIF4E3Q8N5X7 224 aaKnown RBP6.82□□□□□ -1.32
SSBP1-209ENST00000473783 ZNF431Q8TF32 576 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-209ENST00000473783 S100A16Q96FQ6 103 aaKnown RBP6.82□□□□□ -1.32
SSBP1-209ENST00000473783 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 SLC25A31Q9H0C2 315 aa6.82□□□□□ -1.32
SSBP1-209ENST00000473783 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
SSBP1-209ENST00000473783 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 IGHV3-30P01768 117 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 IGHV3-33P01772 117 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 IGHV3-30-3P0DP02 117 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 IGHV3-30-5P0DP03 117 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 CXCL2P19875 107 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 SDC2P34741 201 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 PPT1P50897 306 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 ODF1Q14990 250 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 TEPPQ6URK8 271 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 CCDC71LQ8N9Z2 235 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 OR1S1Q8NH92 325 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 DTD1Q8TEA8 209 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 LINC01600Q96MT4 127 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 TMEM222Q9H0R3 208 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 COPZ2Q9P299 210 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 COX11Q9Y6N1 276 aa6.81□□□□□ -1.32
SSBP1-209ENST00000473783 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
SSBP1-209ENST00000473783 MEF2DQ14814 521 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 ZNF331Q9NQX6 463 aaPredicted RBP6.8□□□□□ -1.32
SSBP1-209ENST00000473783 RPH3ALQ9UNE2 315 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 LPAP08519 4548 aa6.8□□□□□ -1.32
SSBP1-209ENST00000473783 A0A0D9SG52 128 aa6.79□□□□□ -1.32
SSBP1-209ENST00000473783 LINC00854A0A1B0GVQ3 168 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms