RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 MIC13Q5XKP0 118 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 FAM90A2PQ658T7 463 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 C16orf54Q6UWD8 224 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 ZNF546Q86UE3 836 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 GTSCR1Q86UQ5 136 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 ASB13Q8WXK3 278 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 GRAMD2BQ96HH9 432 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 SPAG8Q99932 426 aaPredicted RBP4.99□□□□□ -1.61
SCN9A-206ENST00000472119 NEURL2Q9BR09 285 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 GGTLC1Q9BX51 225 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 ARL6Q9H0F7 186 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 MS4A6AQ9H2W1 248 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 TMEM231Q9H6L2 316 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 WFDC1Q9HC57 220 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 UBQLN2Q9UHD9 624 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 DNASE2O00115 360 aaPredicted RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 NUP62P37198 522 aaPredicted RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 AP2S1P53680 142 aaPredicted RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 PLP1P60201 277 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 PAFAH1B2P68402 229 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 OPCMLQ14982 345 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 LEMD1Q68G75 181 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 SIGLEC15Q6ZMC9 328 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 DEFB125Q8N687 156 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 INO80EQ8NBZ0 244 aaPredicted RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 STXBP6Q8NFX7 210 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 GLMPQ8WWB7 406 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 UHRF2Q96PU4 802 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 ATP5SQ99766 215 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 SCRT1Q9BWW7 348 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 NPCDR1Q9BY65 106 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 SLC25A39Q9BZJ4 359 aaPredicted RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 WDR61Q9GZS3 305 aaKnown RBP4.98□□□□□ -1.61
SCN9A-206ENST00000472119 WFDC10AQ9H1F0 79 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 SLC25A22Q9H936 323 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 HIGD1AQ9Y241 93 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 RFNGQ9Y644 331 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 PXMP4Q9Y6I8 212 aa4.98□□□□□ -1.61
SCN9A-206ENST00000472119 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 RNF222A6NCQ9 220 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 HELTA6NFD8 242 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 OR4C46A6NHA9 309 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 OR11H12B2RN74 326 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 ARPC5O15511 151 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 COX7A2P2O60397 106 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 IFNA5P01569 189 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 CD5P06127 495 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 IGHV4-30-4P0DP06 118 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 RPL29P47914 159 aaKnown RBP4.97□□□□□ -1.61
SCN9A-206ENST00000472119 B2MP61769 119 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 GCSAMLQ5JQS6 135 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 Q6ZRG5 221 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 LINC00305Q7Z4B0 112 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 OR8I2Q8N0Y5 310 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 FAM24BQ8N5W8 94 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 OR11H4Q8NGC9 324 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 SCGB1C1Q8TD33 95 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 TMEM37Q8WXS4 190 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 ST6GAL2Q96JF0 529 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 AQP10Q96PS8 301 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 SHANK2-AS3Q9BTD1 123 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 RSG1Q9BU20 258 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 ARV1Q9H2C2 271 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 SLC25A32Q9H2D1 315 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 TUBA4BQ9H853 241 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 DNAJC4Q9NNZ3 241 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 FBXL17Q9UF56 701 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 TNFSF18Q9UNG2 199 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 SMAD5-AS1Q9Y6J3 95 aa4.97□□□□□ -1.61
SCN9A-206ENST00000472119 PRKDCP78527 4128 aaKnown RBP4.96□□□□□ -1.61
SCN9A-206ENST00000472119 TRAV5A0A0B4J249 113 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 H3BRN7 92 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 K7EQG2 157 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 MPDU1O75352 247 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 SNRPCP09234 159 aaKnown RBP4.96□□□□□ -1.62
SCN9A-206ENST00000472119 FRMD6-AS1P0C7T7 363 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 C1orf194Q5T5A4 169 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 C10orf113Q5VZT2 155 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 APRG1Q8IVJ8 170 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF709Q8N972 641 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 DCANP1Q8TF63 244 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 ASCL2Q99929 193 aa4.96□□□□□ -1.62
SCN9A-206ENST00000472119 RBMY1BA6NDE4 496 aaKnown RBP4.95□□□□□ -1.62
SCN9A-206ENST00000472119 RBMY1EA6NEQ0 496 aaKnown RBP4.95□□□□□ -1.62
SCN9A-206ENST00000472119 C17orf112F2Z3M2 114 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 RBMY1DP0C7P1 496 aaKnown RBP4.95□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF688P0C7X2 276 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 S100A7P31151 101 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 GALR1P47211 349 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 DEFB131AP59861 70 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 FFAR4Q5NUL3 377 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 OR1L4Q8NGR5 311 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 C17orf77Q96MU5 243 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 PFDN5Q99471 154 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 MFFQ9GZY8 342 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms