RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 G3V3Q6 166 aa11.19□□□□□ -0.62
SDC3-203ENST00000471567 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
SDC3-203ENST00000471567 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
SDC3-203ENST00000471567 Q6ZNX1 250 aa11.19□□□□□ -0.62
SDC3-203ENST00000471567 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
SDC3-203ENST00000471567 CLEC5AQ9NY25 188 aa11.19□□□□□ -0.62
SDC3-203ENST00000471567 A0A0J9YX75 114 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 H3BQ15 152 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 PSG3Q16557 428 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 GDF5OSQ5U4N7 250 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
SDC3-203ENST00000471567 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
SDC3-203ENST00000471567 ZNF253O75346 499 aa11.17□□□□□ -0.62
SDC3-203ENST00000471567 DUSP14O95147 198 aaKnown RBP11.17□□□□□ -0.62
SDC3-203ENST00000471567 HIST1H1EP10412 219 aaKnown RBP11.17□□□□□ -0.62
SDC3-203ENST00000471567 DEFB1P60022 68 aa11.17□□□□□ -0.62
SDC3-203ENST00000471567 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
SDC3-203ENST00000471567 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
SDC3-203ENST00000471567 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
SDC3-203ENST00000471567 A8MTW9 85 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 F6UB75 175 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 C4BPBP20851 252 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 RHOBP62745 196 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 PDE6HQ13956 83 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 ACOT6Q3I5F7 207 aaPredicted RBP11.16□□□□□ -0.62
SDC3-203ENST00000471567 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
SDC3-203ENST00000471567 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
SDC3-203ENST00000471567 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 BORCS7-ASMTA0A0B4J1R7 106 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 SNRPCP09234 159 aaKnown RBP11.15□□□□□ -0.62
SDC3-203ENST00000471567 M6PRP20645 277 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 PSG9Q00887 426 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 HSD17B11Q8NBQ5 300 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 CSNK1G2-AS1Q8NCQ2 148 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 OR2G3Q8NGZ4 309 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 OR11H2Q8NH07 326 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 RARRES2Q99969 163 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
SDC3-203ENST00000471567 C3orf84H3BNL1 204 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 H3BTX0 84 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 SLC17A3O00476 420 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 TAAR5O14804 337 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 ARPC5O15511 151 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 PYYP10082 97 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 TAS2R45P59539 299 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 SERF2P84101 59 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 OR8A1Q8NGG7 326 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
SDC3-203ENST00000471567 PAXXQ9BUH6 204 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 MFFQ9GZY8 342 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 RFNGQ9Y644 331 aa11.14□□□□□ -0.63
SDC3-203ENST00000471567 HMSDA8MTL9 139 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 SMLR1H3BR10 107 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 NBEAP1P0C6P0 100 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 CNN1P51911 297 aaKnown RBP11.13□□□□□ -0.63
SDC3-203ENST00000471567 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 RPL7L1Q6DKI1 246 aaKnown RBP11.13□□□□□ -0.63
SDC3-203ENST00000471567 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 GNPNAT1Q96EK6 184 aaPredicted RBP11.13□□□□□ -0.63
SDC3-203ENST00000471567 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
SDC3-203ENST00000471567 A0A1W2PPV4 95 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
SDC3-203ENST00000471567 JTBO76095 146 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 NDUFB4O95168 129 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 MBP02144 154 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 AMBPP02760 352 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 ZNF345Q14585 488 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
SDC3-203ENST00000471567 PRELID1Q9Y255 219 aa11.12□□□□□ -0.63
SDC3-203ENST00000471567 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 OR7C2O60412 319 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
SDC3-203ENST00000471567 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
SDC3-203ENST00000471567 RAB2AP61019 212 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 HIST1H1AQ02539 215 aaPredicted RBP11.11□□□□□ -0.63
SDC3-203ENST00000471567 KCNRGQ8N5I3 272 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 BLNKQ8WV28 456 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 SLC35B3Q9H1N7 401 aa11.11□□□□□ -0.63
SDC3-203ENST00000471567 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
SDC3-203ENST00000471567 OR10J4P0C629 311 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 MIFP14174 115 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 FXYD7P58549 80 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 PQLC2Q6ZP29 291 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms