RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.65
NPHP4-207ENST00000470763 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 FAM222BQ8WU58 562 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 DPF1Q92782 380 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 DKK2Q9UBU2 259 aa10.96□□□□□ -0.65
NPHP4-207ENST00000470763 IGLV2-11P01706 119 aa10.96□□□□□ -0.66
NPHP4-207ENST00000470763 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.66
NPHP4-207ENST00000470763 WFDC12Q8WWY7 111 aa10.96□□□□□ -0.66
NPHP4-207ENST00000470763 TMSB15BA0A087X1C1 80 aa10.96□□□□□ -0.66
NPHP4-207ENST00000470763 SMIM13P0DJ93 91 aa10.96□□□□□ -0.66
NPHP4-207ENST00000470763 ZCCHC24Q8N2G6 241 aaKnown RBP10.96□□□□□ -0.66
NPHP4-207ENST00000470763 OSR1Q8TAX0 266 aaPredicted RBP10.96□□□□□ -0.66
NPHP4-207ENST00000470763 RPUSD1Q9UJJ7 312 aaKnown RBP10.96□□□□□ -0.66
NPHP4-207ENST00000470763 TMEM213A2RRL7 107 aa10.95□□□□□ -0.66
NPHP4-207ENST00000470763 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
NPHP4-207ENST00000470763 MZT1Q08AG7 82 aa10.95□□□□□ -0.66
NPHP4-207ENST00000470763 ZNF788Q6ZQV5 615 aa10.95□□□□□ -0.66
NPHP4-207ENST00000470763 AMN1Q8IY45 258 aa10.95□□□□□ -0.66
NPHP4-207ENST00000470763 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
NPHP4-207ENST00000470763 RAB9BQ9NP90 201 aa10.95□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1W2PNU3 283 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1W2PPI3 338 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 MDS2Q8NDY4 140 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 LYZP61626 148 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
NPHP4-207ENST00000470763 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 SLC25A17O43808 307 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 WFDC2Q14508 124 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 ATP1A1-AS1Q5TC04 95 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 IFI27L1Q96BM0 104 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 GAGE12HA6NDE8 117 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 SIVA1O15304 175 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1B0GV72 72 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 LHBP01229 141 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 C17orf77Q96MU5 243 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 GAFA1Q96PS6 74 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 VGLL1Q99990 258 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 AGRNO00468 2067 aa10.93□□□□□ -0.66
NPHP4-207ENST00000470763 HBDP02042 147 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 CCL3L1P16619 93 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 KIR2DL2P43627 348 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-207ENST00000470763 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 PTPRQQ9UMZ3 2332 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.92□□□□□ -0.66
NPHP4-207ENST00000470763 TNFRSF1AP19438 455 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 ZNF833PQ6ZTB9 187 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 TMEM167AQ8TBQ9 72 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 RITA1Q96K30 269 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 OTORQ9NRC9 128 aa10.92□□□□□ -0.66
NPHP4-207ENST00000470763 CRIP1P50238 77 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 CD300EQ496F6 205 aaPredicted RBP10.91□□□□□ -0.66
NPHP4-207ENST00000470763 CCDC144NLQ6NUI1 221 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 ARPC1AQ92747 370 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 CACNA1GO43497 2377 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 CFAP46Q8IYW2 2715 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 IGHV3-72A0A0B4J1Y9 119 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 LYZL1Q6UWQ5 148 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 OR4C13Q8NGP0 309 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 HIGD1AQ9Y241 93 aa10.91□□□□□ -0.66
NPHP4-207ENST00000470763 NDUFS7O75251 213 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 RAB9AP51151 201 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 C8orf46Q8TAG6 207 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 C8orf49Q96NF6 230 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 SMPXQ9UHP9 88 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1W2PRD5 423 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1W2PRF3 423 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 A0A1W2PRM7 423 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 TMEM189A5PLL7 270 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 ORMDL3Q8N138 153 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 TRGV9Q99603 122 aa10.9□□□□□ -0.66
NPHP4-207ENST00000470763 INS-IGF2F8WCM5 200 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 NDUFS8O00217 210 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 NPYP01303 97 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
NPHP4-207ENST00000470763 RNF7Q9UBF6 113 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 SH3BGRL2Q9UJC5 107 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 H3BMG7 143 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 M0R1B8 84 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
NPHP4-207ENST00000470763 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 OR10X1Q8NGY0 326 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 M0R3E3 92 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
NPHP4-207ENST00000470763 CEACAM3P40198 252 aa10.89□□□□□ -0.67
NPHP4-207ENST00000470763 FAM104BQ5XKR9 115 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms