RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
CPSF4-210ENST00000469897 SLC38A11Q08AI6 406 aa9.35□□□□□ -0.91
CPSF4-210ENST00000469897 ARL16Q0P5N6 197 aa9.35□□□□□ -0.91
CPSF4-210ENST00000469897 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
CPSF4-210ENST00000469897 RPUSD4Q96CM3 377 aaKnown RBP9.35□□□□□ -0.91
CPSF4-210ENST00000469897 A0A087X0K7 114 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 PLAC8L1A1L4L8 177 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 CENPXA8MT69 81 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 GOSR2O14653 212 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
CPSF4-210ENST00000469897 NUDT3O95989 172 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 TSPOP30536 169 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 TAS2R30P59541 319 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 TAS2R60P59551 318 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 ZBTB8BQ8NAP8 495 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-210ENST00000469897 SDHCQ99643 169 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-210ENST00000469897 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 MGAT4CQ9UBM8 478 aa9.34□□□□□ -0.91
CPSF4-210ENST00000469897 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 CBY3A6NI87 242 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 H3BTX0 84 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 K7EPK0 472 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 TSC22D2O75157 780 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-210ENST00000469897 BTCP35070 178 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 LINC00305Q7Z4B0 112 aa9.33□□□□□ -0.92
CPSF4-210ENST00000469897 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 AGPAT2O15120 278 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 ATP5G1P05496 136 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 ATP5G3P48201 142 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 PXDC1Q5TGL8 231 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 MITD1Q8WV92 249 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 TMEM37Q8WXS4 190 aa9.32□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF331Q9NQX6 463 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-210ENST00000469897 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF701M0R085 212 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-210ENST00000469897 CCSO14618 274 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 IL7P13232 177 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 CDKN1BP46527 198 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-210ENST00000469897 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 MGST2Q99735 147 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 GGACTQ9BVM4 153 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 PARD6GQ9BYG4 376 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-210ENST00000469897 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
CPSF4-210ENST00000469897 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 TIMM8BQ9Y5J9 83 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-210ENST00000469897 PKD1P98161 4303 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
CPSF4-210ENST00000469897 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 H3BQ15 152 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 L7N2F9 121 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 PLA2G10O15496 165 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 VAMP2P63027 116 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 LCN15Q6UWW0 184 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF546Q86UE3 836 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF575Q86XF7 245 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
CPSF4-210ENST00000469897 LSM5Q9Y4Y9 91 aaKnown RBP9.3□□□□□ -0.92
CPSF4-210ENST00000469897 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 H7BYZ3 331 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 SLC17A3O00476 420 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 CXCL2P19875 107 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 CAMLGP49069 296 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 BCAP31P51572 246 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 CCL18P55774 89 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 OR5I1Q13606 314 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 OPCMLQ14982 345 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 CNPY1Q3B7I2 92 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 RNF141Q8WVD5 230 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 LINC00588Q9Y4M8 146 aa9.29□□□□□ -0.92
CPSF4-210ENST00000469897 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 FAM24AA6NFZ4 105 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 J3KRW8 73 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 CST7O76096 145 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 CAV2P51636 162 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 TNP2Q05952 138 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 ZNF846Q147U1 533 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 Q6ZRG5 221 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 NRARPQ7Z6K4 114 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 CCDC28AQ8IWP9 274 aa9.28□□□□□ -0.92
CPSF4-210ENST00000469897 RNASE8Q8TDE3 154 aaKnown RBP9.28□□□□□ -0.92
CPSF4-210ENST00000469897 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-210ENST00000469897 C20orf85Q9H1P6 137 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms