RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ZNF688P0C7X2 276 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 DEFB131AP59861 70 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 MORN5Q5VZ52 161 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 KIR2DL5AQ8N109 375 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 RPP25LQ8N5L8 163 aaKnown RBP9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 KIR2DL5BQ8NHK3 375 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 B9D2Q9BPU9 175 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 SLC25A2Q9BXI2 301 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 PRELID1Q9Y255 219 aa9.38□□□□□ -0.91
SPTLC1-204ENST00000469778 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 RAB5CP51148 216 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 APOC4P55056 127 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-204ENST00000469778 H3BQ15 152 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 OR7C2O60412 319 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 CXorf1O96002 111 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 RAB2AP61019 212 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 MORN3Q6PF18 240 aaPredicted RBP9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 STHQ8IWL8 128 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 C9orf62Q8N4C0 152 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 RAB24Q969Q5 203 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 AAMDCQ9H7C9 122 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
SPTLC1-204ENST00000469778 CTXND1A0A1B0GTU2 59 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 PSG3Q16557 428 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 FAM122CQ6P4D5 195 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 APRG1Q8IVJ8 170 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 FAM24BQ8N5W8 94 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
SPTLC1-204ENST00000469778 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 CD300CQ08708 224 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 SUN5Q8TC36 379 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
SPTLC1-204ENST00000469778 H3BMM0 161 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 PYYP10082 97 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 UBE2L3P68036 154 aaKnown RBP9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 Q6ZWC4 215 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 TRPT1Q86TN4 253 aaKnown RBP9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 CITED4Q96RK1 184 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 C1QTNF4Q9BXJ3 329 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 CSTL1Q9H114 145 aa9.33□□□□□ -0.92
SPTLC1-204ENST00000469778 A0A0J9YX75 114 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 TEX46H3BTG2 121 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 NDUFB4O95168 129 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 OR10J4P0C629 311 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 CSN1S1P47710 185 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 HAGHQ16775 308 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 MBD3L1Q8WWY6 194 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 TP53TG1Q9Y2A0 90 aa9.32□□□□□ -0.92
SPTLC1-204ENST00000469778 A8MTW9 85 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 AMBPP02760 352 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 ARL14EPLP0DKL9 152 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 GCHFRP30047 84 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 OR8A1Q8NGG7 326 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms