RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 KIR2DL5BA0A0G2JN68 375 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 KIR2DL5BA0A0G2JPC4 375 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 H3BQ15 152 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
VPS13D-204ENST00000469054 APOC4P55056 127 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 RHOBP62745 196 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 SERF2P84101 59 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 IGFL4Q6B9Z1 124 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 LCN15Q6UWW0 184 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 KIR2DL5AQ8N109 375 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 KIR2DL5BQ8NHK3 375 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 LRRC20Q8TCA0 184 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 C20orf173Q96LM9 149 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 TM2D3Q9BRN9 247 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 SH3BGRL3Q9H299 93 aa8.81□□□□□ -1
VPS13D-204ENST00000469054 HUWE1Q7Z6Z7 4374 aaKnown RBP8.81□□□□□ -1
VPS13D-204ENST00000469054 H3BTX0 84 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 MBP02144 154 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 C1QBP02746 253 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 RAB2AP61019 212 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 GUK1Q16774 197 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 FOXI2Q6ZQN5 318 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 TRPT1Q86TN4 253 aaKnown RBP8.8□□□□□ -1
VPS13D-204ENST00000469054 OR10G4Q8NGN3 311 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 OR10G9Q8NGN4 311 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 OR10G7Q8NGN6 311 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 SAT2Q96F10 170 aaPredicted RBP8.8□□□□□ -1
VPS13D-204ENST00000469054 SPATA25Q9BR10 227 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 CSTL1Q9H114 145 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 OR51M1Q9H341 326 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 ZMAT4Q9H898 229 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 ZNF331Q9NQX6 463 aaPredicted RBP8.8□□□□□ -1
VPS13D-204ENST00000469054 RPRMQ9NS64 109 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
VPS13D-204ENST00000469054 TRBV19A0A075B6N1 114 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 A0A1W2PPV4 95 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 KANTRA0A1W2PQU2 76 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 H3BMM0 161 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 SLC17A3O00476 420 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 UBE2CO00762 179 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 BCL2L11O43521 198 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 PYYP10082 97 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 HLA-DRB4P13762 266 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 TAS2R45P59539 299 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 DEFB1P60022 68 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 PSG3Q16557 428 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 GDF5OSQ5U4N7 250 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 FAM122CQ6P4D5 195 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 TMUB2Q71RG4 321 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 RNF182Q8N6D2 247 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 HYLS1Q96M11 299 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 PAXXQ9BUH6 204 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 SAV1Q9H4B6 383 aaPredicted RBP8.79□□□□□ -1
VPS13D-204ENST00000469054 HLA-DRB4X5D2U9 266 aa8.79□□□□□ -1
VPS13D-204ENST00000469054 F6UB75 175 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 ZNF253O75346 499 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 EIF3GO75821 320 aaKnown RBP eCLIP8.78□□□□□ -1
VPS13D-204ENST00000469054 SPP1P10451 314 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 HLA-DMBP28068 263 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 CD300CQ08708 224 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 PDE6HQ13956 83 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 LGALSLQ3ZCW2 172 aaPredicted RBP8.78□□□□□ -1
VPS13D-204ENST00000469054 KHDC3LQ587J8 217 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
VPS13D-204ENST00000469054 BLNKQ8WV28 456 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 RNF141Q8WVD5 230 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 FXYD5Q96DB9 178 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 ZNF503Q96F45 646 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
VPS13D-204ENST00000469054 CLEC5AQ9NY25 188 aa8.78□□□□□ -1
VPS13D-204ENST00000469054 A0A0J9YX75 114 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 OR7C2O60412 319 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 PFDN1O60925 122 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 NDUFB4O95168 129 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 OR10J4P0C629 311 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-204ENST00000469054 PSG9Q00887 426 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 MORN3Q6PF18 240 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-204ENST00000469054 Q6ZWC4 215 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 ZNF738Q8NE65 137 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 U3KQK5 164 aa8.77□□□□□ -1.01
VPS13D-204ENST00000469054 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-204ENST00000469054 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
VPS13D-204ENST00000469054 AKR1C8PQ5T2L2 129 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 PQLC2Q6ZP29 291 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 OR4B1Q8NGF8 309 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 RAB24Q969Q5 203 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 RPUSD4Q96CM3 377 aaKnown RBP8.76□□□□□ -1.01
VPS13D-204ENST00000469054 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
VPS13D-204ENST00000469054 ACTR3CQ9C0K3 210 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-204ENST00000469054 RETNQ9HD89 108 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms