RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PSG9Q00887 426 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 ARL16Q0P5N6 197 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 ATP6V1FQ16864 119 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 FAM78BQ5VT40 261 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 AQP10Q96PS8 301 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 SLC25A39Q9BZJ4 359 aaPredicted RBP13.76□□□□□ -0.21
COL7A1-207ENST00000467985 SMIM3Q9BZL3 60 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 UQCC1Q9NVA1 299 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 TNFSF18Q9UNG2 199 aa13.76□□□□□ -0.21
COL7A1-207ENST00000467985 UBE2L5PA0A1B0GUS4 154 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-207ENST00000467985 IGLL5B9A064 214 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 G3V3Q6 166 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 H3BRN7 92 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 LINC00869P0C866 280 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 ZNF705DP0CH99 300 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-207ENST00000467985 ZNF705BP0CI00 300 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-207ENST00000467985 RPL7P18124 248 aaKnown RBP13.75□□□□□ -0.21
COL7A1-207ENST00000467985 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 Q6ZTC4 211 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 SHANK2-AS3Q9BTD1 123 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 SCRT1Q9BWW7 348 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 DOK5Q9P104 306 aa13.75□□□□□ -0.21
COL7A1-207ENST00000467985 C1QBP02746 253 aa13.74□□□□□ -0.21
COL7A1-207ENST00000467985 PXDC1Q5TGL8 231 aa13.74□□□□□ -0.21
COL7A1-207ENST00000467985 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
COL7A1-207ENST00000467985 GOLT1BQ9Y3E0 138 aa13.74□□□□□ -0.21
COL7A1-207ENST00000467985 F6UB75 175 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 IFNA5P01569 189 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 OR5G3P0C626 314 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 FXYD7P58549 80 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 RAB31Q13636 194 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 C20orf173Q96LM9 149 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 C17orf77Q96MU5 243 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 ATP5SQ99766 215 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 APLNQ9ULZ1 77 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 RFNGQ9Y644 331 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
COL7A1-207ENST00000467985 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 HMSDA8MTL9 139 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 A8MTW9 85 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 DUSP14O95147 198 aaKnown RBP13.72□□□□□ -0.21
COL7A1-207ENST00000467985 CD300CQ08708 224 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 OR11H4Q8NGC9 324 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 HYLS1Q96M11 299 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 ARL6Q9H0F7 186 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 SLC35B3Q9H1N7 401 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 CELA1Q9UNI1 258 aa13.72□□□□□ -0.21
COL7A1-207ENST00000467985 IGHV3OR16-12A0A075B7B8 117 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 RNF222A6NCQ9 220 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 AMBPP02760 352 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 SPART-AS1P0CW21 52 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 FGF7P21781 194 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 RPP25LQ8N5L8 163 aaKnown RBP13.71□□□□□ -0.21
COL7A1-207ENST00000467985 SCGB1C1Q8TD33 95 aa13.71□□□□□ -0.21
COL7A1-207ENST00000467985 DEFB131BA0A096LNP1 70 aa13.7□□□□□ -0.22
COL7A1-207ENST00000467985 ZNF266Q14584 549 aa13.7□□□□□ -0.22
COL7A1-207ENST00000467985 UHRF2Q96PU4 802 aa13.7□□□□□ -0.22
COL7A1-207ENST00000467985 VPS13DQ5THJ4 4388 aa13.7□□□□□ -0.22
COL7A1-207ENST00000467985 IGHV4-4A0A075B6R2 117 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 A0A087X0K7 114 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 TRAV8-2A0A0B4J237 113 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 A0A0D9SG52 128 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 AGPAT2O15120 278 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 ZNF345Q14585 488 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 VWC2Q2TAL6 325 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 ARV1Q9H2C2 271 aa13.69□□□□□ -0.22
COL7A1-207ENST00000467985 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 MPDU1O75352 247 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 HBE1P02100 147 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 CAMLGP49069 296 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
COL7A1-207ENST00000467985 EMP1P54849 157 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 AMTNQ6UX39 209 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 PATE2Q6UY27 113 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 RNF182Q8N6D2 247 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 ZNF738Q8NE65 137 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 LRRC20Q8TCA0 184 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 IGF2BP2-AS1Q96M15 143 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
COL7A1-207ENST00000467985 TAAR5O14804 337 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 ZNF767PQ75MW2 155 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 C1orf158Q8N1D5 194 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 KCNRGQ8N5I3 272 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 ARPC5LQ9BPX5 153 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 TMEM208Q9BTX3 173 aa13.67□□□□□ -0.22
COL7A1-207ENST00000467985 C17orf112F2Z3M2 114 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 COX7A2P2O60397 106 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 INSP01308 110 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 CXCL2P19875 107 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 RRN3P1Q2M238 152 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 MGST2Q99735 147 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
COL7A1-207ENST00000467985 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms