RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PRDM13Q9H4Q3 707 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 C5orf52A6NGY3 159 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 A6NJY4 79 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 CD33P20138 364 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
BRAT1-203ENST00000467558 Q5PR19 223 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 STHQ8IWL8 128 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 CYYR1Q96J86 154 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 CEP192Q8TEP8 1941 aa11.05□□□□□ -0.64
BRAT1-203ENST00000467558 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
BRAT1-203ENST00000467558 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
BRAT1-203ENST00000467558 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 GZMBP10144 247 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 GUSBP1Q15486 140 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 ADORA2A-AS1P86434 159 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 LINC00479Q96M42 142 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 EML6Q6ZMW3 1958 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 OR11H12B2RN74 326 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
BRAT1-203ENST00000467558 OR11H1Q8NG94 326 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 OR11H2Q8NH07 326 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
BRAT1-203ENST00000467558 DAZ1Q9NQZ3 744 aaKnown RBP11.04□□□□□ -0.64
BRAT1-203ENST00000467558 G3V318 75 aa11.03□□□□□ -0.64
BRAT1-203ENST00000467558 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
BRAT1-203ENST00000467558 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
BRAT1-203ENST00000467558 Q8TAT8 98 aa11.03□□□□□ -0.64
BRAT1-203ENST00000467558 J3QLI3 93 aa11.02□□□□□ -0.64
BRAT1-203ENST00000467558 OVOL3O00110 214 aa11.02□□□□□ -0.64
BRAT1-203ENST00000467558 HIST3H2BBQ8N257 126 aa11.02□□□□□ -0.64
BRAT1-203ENST00000467558 NUP35Q8NFH5 326 aa11.02□□□□□ -0.64
BRAT1-203ENST00000467558 GEMIN7Q9H840 131 aaKnown RBP11.02□□□□□ -0.64
BRAT1-203ENST00000467558 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
BRAT1-203ENST00000467558 MSMPQ1L6U9 139 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 MAPK1IP1LQ8NDC0 245 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 A0A0C4DFX4 3053 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 TRGV11A0A075B6L2 103 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 H3BVH4 76 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 ERASQ7Z444 233 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 Q86TA4 180 aa11.02□□□□□ -0.65
BRAT1-203ENST00000467558 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
BRAT1-203ENST00000467558 CDH23Q9H251 3354 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 HBDP02042 147 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PRR20EP86478 221 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PRR20CP86479 221 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PRR20DP86480 221 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PRR20BP86481 221 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PRR20AP86496 221 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
BRAT1-203ENST00000467558 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 GCSHP23434 173 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 LYZL1Q6UWQ5 148 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 MED12LQ86YW9 2145 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
BRAT1-203ENST00000467558 NIT1Q86X76 327 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 THAP8Q8NA92 274 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 FOXC2Q99958 501 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 PTPN13Q12923 2485 aa11.01□□□□□ -0.65
BRAT1-203ENST00000467558 TRBV19A0A075B6N1 114 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 ACTL10Q5JWF8 245 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 IGFL4Q6B9Z1 124 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 ST20Q9HBF5 79 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 SH2D1AO60880 128 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
BRAT1-203ENST00000467558 IGLC7A0M8Q6 106 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
BRAT1-203ENST00000467558 VWC2Q2TAL6 325 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 C10orf91Q5T1B1 145 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 C1orf194Q5T5A4 169 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 GFI1BQ5VTD9 330 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 C14orf144Q96I85 54 aa11□□□□□ -0.65
BRAT1-203ENST00000467558 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 J3QKU1 62 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 AMBPP02760 352 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 PRSS2P07478 247 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 SLC25A2Q9BXI2 301 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 PFN1P07737 140 aaKnown RBP10.99□□□□□ -0.65
BRAT1-203ENST00000467558 LYPD6BQ8NI32 183 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 Q96MF0 132 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 FNDC4Q9H6D8 234 aaPredicted RBP10.99□□□□□ -0.65
BRAT1-203ENST00000467558 FCN3O75636 299 aa10.99□□□□□ -0.65
BRAT1-203ENST00000467558 TRAV8-6A0A0B4J262 113 aa10.98□□□□□ -0.65
BRAT1-203ENST00000467558 TMEM249Q2WGJ8 235 aa10.98□□□□□ -0.65
BRAT1-203ENST00000467558 LCNL1Q6ZST4 164 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms