RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ORM2P19652 201 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 S100A7P31151 101 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 LYSMD2Q8IV50 215 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 TM2D2Q9BX73 214 aa6.73□□□□□ -1.33
HDAC3-203ENST00000467533 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 RBFOX3A6NFN3 312 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 SPINK4O60575 86 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 CFDP00746 253 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-203ENST00000467533 CLEC2LP0C7M8 214 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 TNFSF8P32971 234 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 SDC2P34741 201 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 PRSS3P35030 304 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 GPX4P36969 197 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-203ENST00000467533 AQP4P55087 323 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 LINC01556Q5JQF7 62 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 STEAP1BQ6NZ63 245 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 IZUMO2Q6UXV1 221 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 Q6ZRU5 148 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 LGI3Q8N145 548 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 CCDC71LQ8N9Z2 235 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 VGLL1Q99990 258 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 MRPL16Q9NX20 251 aaKnown RBP6.72□□□□□ -1.33
HDAC3-203ENST00000467533 COPZ2Q9P299 210 aa6.72□□□□□ -1.33
HDAC3-203ENST00000467533 RPL7P18124 248 aaKnown RBP6.71□□□□□ -1.34
HDAC3-203ENST00000467533 PPT1P50897 306 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 FHL2Q14192 279 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 MEF2DQ14814 521 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 MORN5Q5VZ52 161 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 BPIFCQ8NFQ6 507 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 BLNKQ8WV28 456 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 S100A16Q96FQ6 103 aaKnown RBP6.71□□□□□ -1.34
HDAC3-203ENST00000467533 TXNDC17Q9BRA2 123 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 RAB26Q9ULW5 256 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 KLF12Q9Y4X4 402 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 U3KQ87 197 aa6.71□□□□□ -1.34
HDAC3-203ENST00000467533 IGKV1OR2-108A0A075B7D4 117 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 H3BRN7 92 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 ORM1P02763 201 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 LEPP41159 167 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 TCL1AP56279 114 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 LELP1Q5T871 98 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 THAP8Q8NA92 274 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 DTD1Q8TEA8 209 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 MRPL32Q9BYC8 188 aaKnown RBP6.7□□□□□ -1.34
HDAC3-203ENST00000467533 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 Q9H521 79 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 SSR3Q9UNL2 185 aa6.7□□□□□ -1.34
HDAC3-203ENST00000467533 A0A087X0K7 114 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 CRYM-AS1A6NIL9 109 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 UBE2NLQ5JXB2 153 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 GPR107Q5VW38 600 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 EIF4E3Q8N5X7 224 aaKnown RBP6.69□□□□□ -1.34
HDAC3-203ENST00000467533 ZBTB8BQ8NAP8 495 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-203ENST00000467533 LHFPL5Q8TAF8 219 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 SLC25A31Q9H0C2 315 aa6.69□□□□□ -1.34
HDAC3-203ENST00000467533 TRAV8-6A0A0B4J262 113 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 C9JCJ5 164 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 B3GALNT1O75752 331 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 CDS2O95674 445 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 SULT1A3P0DMM9 295 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 SULT1A4P0DMN0 295 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 RAP2BP61225 183 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 LAGE3Q14657 143 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 ODF1Q14990 250 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 OR10J3Q5JRS4 329 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 OR1S1Q8NH92 325 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 ZNF431Q8TF32 576 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-203ENST00000467533 BAALCQ8WXS3 180 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 SHANK2-AS3Q9BTD1 123 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 TMEM222Q9H0R3 208 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 RBKSQ9H477 322 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 CACFD1Q9UGQ2 172 aa6.68□□□□□ -1.34
HDAC3-203ENST00000467533 PAIP2BQ9ULR5 123 aaKnown RBP6.68□□□□□ -1.34
HDAC3-203ENST00000467533 LINC00854A0A1B0GVQ3 168 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 PRAC2D3DTV9 90 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 TNFAIP8O95379 198 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 SFTA3P0C7M3 94 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 ZNF846Q147U1 533 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 ANXA2RQ3ZCQ2 193 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 TMEM182Q6ZP80 229 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-203ENST00000467533 LHFPL1Q86WI0 220 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 SELENOHQ8IZQ5 122 aaKnown RBP6.67□□□□□ -1.34
HDAC3-203ENST00000467533 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 ZFAND1Q8TCF1 268 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 GPX8Q8TED1 209 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 HIGD1AQ9Y241 93 aa6.67□□□□□ -1.34
HDAC3-203ENST00000467533 C7orf71A4D174 169 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 SLC25A5P05141 298 aaKnown RBP6.66□□□□□ -1.34
HDAC3-203ENST00000467533 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms