RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 IGLC2P0DOY2 106 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 ID1P41134 155 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 PSMB3P49720 205 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 CD300CQ08708 224 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 PSMG4Q5JS54 123 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 SAMD13Q5VXD3 122 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 FAM167A-AS1Q96KT0 104 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 C16orf92Q96LL3 132 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 ARPC5LQ9BPX5 153 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 SLC25A2Q9BXI2 301 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 TMEM14CQ9P0S9 112 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 FUT9Q9Y231 359 aa14.09□□□□□ -0.15
USP11-205ENST00000467378 ALMS1Q8TCU4 4167 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 TRAV8-2A0A0B4J237 113 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 M6PRP20645 277 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 SERF2P84101 59 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 HAGHQ16775 308 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 ACOT6Q3I5F7 207 aaPredicted RBP14.08□□□□□ -0.16
USP11-205ENST00000467378 GNPNAT1Q96EK6 184 aaPredicted RBP14.08□□□□□ -0.16
USP11-205ENST00000467378 SPATA25Q9BR10 227 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 SH3BGRL3Q9H299 93 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 HERC2O95714 4834 aa14.08□□□□□ -0.16
USP11-205ENST00000467378 LOC102724200A0A096LPH7 203 aaPredicted RBP14.07□□□□□ -0.16
USP11-205ENST00000467378 H3BQ15 152 aa14.07□□□□□ -0.16
USP11-205ENST00000467378 SNRPCP09234 159 aaKnown RBP14.07□□□□□ -0.16
USP11-205ENST00000467378 PLECQ15149 4684 aaKnown RBP14.07□□□□□ -0.16
USP11-205ENST00000467378 TMUB2Q71RG4 321 aa14.07□□□□□ -0.16
USP11-205ENST00000467378 C20orf173Q96LM9 149 aa14.07□□□□□ -0.16
USP11-205ENST00000467378 LINC00052Q96N35 136 aa14.07□□□□□ -0.16
USP11-205ENST00000467378 HRH4Q9H3N8 390 aa14.07□□□□□ -0.16
USP11-205ENST00000467378 BCL2L11O43521 198 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 RAB2AP61019 212 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 RHOBP62745 196 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 LGALSLQ3ZCW2 172 aaPredicted RBP14.06□□□□□ -0.16
USP11-205ENST00000467378 IGFL4Q6B9Z1 124 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 IL17DQ8TAD2 202 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 SAT2Q96F10 170 aaPredicted RBP14.06□□□□□ -0.16
USP11-205ENST00000467378 HYLS1Q96M11 299 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 ZNF586Q9NXT0 402 aa14.06□□□□□ -0.16
USP11-205ENST00000467378 KNCNA6PVL3 124 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 PYYP10082 97 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 HIST1H1EP10412 219 aaKnown RBP14.05□□□□□ -0.16
USP11-205ENST00000467378 LCN15Q6UWW0 184 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 OR10G4Q8NGN3 311 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 OR10G9Q8NGN4 311 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 OR10G7Q8NGN6 311 aa14.05□□□□□ -0.16
USP11-205ENST00000467378 ZNF331Q9NQX6 463 aaPredicted RBP14.05□□□□□ -0.16
USP11-205ENST00000467378 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 H3BTX0 84 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 RPL35AP18077 110 aaKnown RBP14.04□□□□□ -0.16
USP11-205ENST00000467378 HLA-DMBP28068 263 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 DEFB1P60022 68 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 GUK1Q16774 197 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 RNF182Q8N6D2 247 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 ZNF503Q96F45 646 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 OR51M1Q9H341 326 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 FRAS1Q86XX4 4008 aa14.04□□□□□ -0.16
USP11-205ENST00000467378 SLC17A3O00476 420 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP11-205ENST00000467378 MBP02144 154 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 SPP1P10451 314 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 ACTL10Q5JWF8 245 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 FAM122CQ6P4D5 195 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
USP11-205ENST00000467378 STHQ8IWL8 128 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 RPP25LQ8N5L8 163 aaKnown RBP14.03□□□□□ -0.16
USP11-205ENST00000467378 SLC50A1Q9BRV3 221 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 RPRMQ9NS64 109 aa14.03□□□□□ -0.16
USP11-205ENST00000467378 PCLOQ9Y6V0 5065 aa14.02□□□□□ -0.16
USP11-205ENST00000467378 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 KIR2DL5BA0A0G2JN68 375 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 KIR2DL5BA0A0G2JPC4 375 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 A0A1W2PPV4 95 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 PSG3Q16557 428 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 GDF5OSQ5U4N7 250 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 KIR2DL5AQ8N109 375 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 KIR2DL5BQ8NHK3 375 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 FXYD5Q96DB9 178 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 PAXXQ9BUH6 204 aa14.02□□□□□ -0.17
USP11-205ENST00000467378 ZNF471Q9BX82 626 aaPredicted RBP14.02□□□□□ -0.17
USP11-205ENST00000467378 SAV1Q9H4B6 383 aaPredicted RBP14.02□□□□□ -0.17
USP11-205ENST00000467378 H3BMM0 161 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 PFDN1O60925 122 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 ZNF253O75346 499 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 NDUFB4O95168 129 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 APOC4P55056 127 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 TAS2R45P59539 299 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 KHDC3LQ587J8 217 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 TMEM41BQ5BJD5 291 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 FOXI2Q6ZQN5 318 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 RNF141Q8WVD5 230 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
USP11-205ENST00000467378 F6UB75 175 aa14□□□□□ -0.17
USP11-205ENST00000467378 OR7C2O60412 319 aa14□□□□□ -0.17
USP11-205ENST00000467378 OR10J4P0C629 311 aa14□□□□□ -0.17
USP11-205ENST00000467378 NBEAP1P0C6P0 100 aa14□□□□□ -0.17
USP11-205ENST00000467378 CDC34P49427 236 aaPredicted RBP14□□□□□ -0.17
USP11-205ENST00000467378 PDE6HQ13956 83 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms