RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 IGKV1-17P01599 117 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 IGHV1-8P0DP01 117 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 CCL8P80075 99 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 PDE6HQ13956 83 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 MRPL51Q4U2R6 128 aaKnown RBP5.76□□□□□ -1.49
USP48-206ENST00000464577 PLA2G2CQ5R387 149 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 C1orf185Q5T7R7 199 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 LYZL1Q6UWQ5 148 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 TMEM133Q9H2Q1 129 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 FAM215AQ9Y5M1 114 aa5.76□□□□□ -1.49
USP48-206ENST00000464577 LOC389332A0A1B0GUA5 103 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 TMEM213A2RRL7 107 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 SMIM13P0DJ93 91 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 SCGB1A1P11684 91 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 HLA-DRB4P13762 266 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 PLGLAQ15195 96 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 S100A7AQ86SG5 101 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 AMN1Q8IY45 258 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 KAAG1Q9UBP8 84 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 HLA-DRB4X5D2U9 266 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 NAV3Q8IVL0 2385 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 IGHV3-72A0A0B4J1Y9 119 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 VSTM5A8MXK1 200 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 SH2D1AO60880 128 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 NDUFS7O75251 213 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 RBP4P02753 201 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 CNTFRP26992 372 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 S100A7P31151 101 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 SRSF2Q01130 221 aaKnown RBP5.75□□□□□ -1.49
USP48-206ENST00000464577 SAMD5Q5TGI4 173 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 PPP1R27Q86WC6 154 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 PCP2Q8IVA1 136 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 C17orf77Q96MU5 243 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 RNF5Q99942 180 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 TPPP3Q9BW30 176 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 ZMAT4Q9H898 229 aa5.75□□□□□ -1.49
USP48-206ENST00000464577 INTS1Q8N201 2190 aaKnown RBP5.74□□□□□ -1.49
USP48-206ENST00000464577 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 WI2-2373I1.2A0A1W2PRP0 233 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 K7EIM0 57 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 NPYP01303 97 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 NMUP48645 174 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 ADIPOQQ15848 244 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 LYPD2Q6UXB3 125 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 TMEM108Q6UXF1 575 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 ZNF491Q8N8L2 437 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 RNF125Q96EQ8 232 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 C8orf49Q96NF6 230 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 NAA38Q9BRA0 125 aaKnown RBP5.74□□□□□ -1.49
USP48-206ENST00000464577 AAMDCQ9H7C9 122 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 CTSZQ9UBR2 303 aa5.74□□□□□ -1.49
USP48-206ENST00000464577 TECTAO75443 2155 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 IGHV1-3A0A0C4DH29 117 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 IGLV1-47P01700 117 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 IGLC6P0CF74 106 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 APELAP0DMC3 54 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 CKS2P33552 79 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 RAB1BQ9H0U4 201 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 RNF223E7ERA6 249 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 EVI2AP22794 236 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 FCER1GP30273 86 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 SRSF1Q07955 248 aaKnown RBP eCLIP5.73□□□□□ -1.49
USP48-206ENST00000464577 FAM27E3Q08E93 113 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 SRSF6Q13247 344 aaKnown RBP5.73□□□□□ -1.49
USP48-206ENST00000464577 ODF1Q14990 250 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 PHLDA1Q8WV24 401 aaPredicted RBP5.73□□□□□ -1.49
USP48-206ENST00000464577 ZNF48Q96MX3 618 aaPredicted RBP5.73□□□□□ -1.49
USP48-206ENST00000464577 ASCL2Q99929 193 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 CHAC1Q9BUX1 264 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 MAP1LC3AQ9H492 121 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 DKK2Q9UBU2 259 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 SMPXQ9UHP9 88 aa5.73□□□□□ -1.49
USP48-206ENST00000464577 FREM2Q5SZK8 3169 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 M0R3E3 92 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 WIPF1O43516 503 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 IL4P05112 153 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 BMI1P35226 326 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 FXYD2P54710 66 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 PRSS57Q6UWY2 283 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 WFDC8Q8IUA0 241 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
USP48-206ENST00000464577 VGLL1Q99990 258 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 CNFNQ9BYD5 112 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 FBXL15Q9H469 300 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
USP48-206ENST00000464577 HHLA3Q9XRX5 114 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 FRYLO94915 3013 aa5.72□□□□□ -1.49
USP48-206ENST00000464577 TMSB15BA0A087X1C1 80 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 BUB1B-PAK6H3BSN5 160 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 NDUFS8O00217 210 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 ATP5LO75964 103 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 GCSHP23434 173 aa5.71□□□□□ -1.49
USP48-206ENST00000464577 FCGR2BP31994 310 aaPredicted RBP5.71□□□□□ -1.49
USP48-206ENST00000464577 TAL2Q16559 108 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms