RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 IGHV1-8P0DP01 117 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 FOXC1Q12948 553 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 Q8TAT8 98 aa12.79□□□□□ -0.36
SMC4-204ENST00000462787 PLSCR4Q9NRQ2 329 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 DOCK9Q9BZ29 2069 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
SMC4-204ENST00000462787 KIAA2026Q5HYC2 2103 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 TMEM101Q96IK0 257 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
SMC4-204ENST00000462787 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
SMC4-204ENST00000462787 IGKV3-20P01619 116 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
SMC4-204ENST00000462787 RBMY1A1P0DJD3 496 aaKnown RBP12.78□□□□□ -0.36
SMC4-204ENST00000462787 RBMY1CP0DJD4 496 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 CLEC2AQ6UVW9 174 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 VCYO14598 125 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 CD28P10747 220 aa12.78□□□□□ -0.36
SMC4-204ENST00000462787 MYMXA0A1B0GTQ4 84 aa12.77□□□□□ -0.36
SMC4-204ENST00000462787 LTBRP36941 435 aa12.77□□□□□ -0.36
SMC4-204ENST00000462787 C11orf1Q9H5F2 150 aa12.77□□□□□ -0.36
SMC4-204ENST00000462787 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.37
SMC4-204ENST00000462787 A0A1W2PPI3 338 aa12.77□□□□□ -0.37
SMC4-204ENST00000462787 TAX1BP3O14907 124 aa12.77□□□□□ -0.37
SMC4-204ENST00000462787 PRB4P10163 310 aaPredicted RBP12.77□□□□□ -0.37
SMC4-204ENST00000462787 YPEL4Q96NS1 127 aa12.77□□□□□ -0.37
SMC4-204ENST00000462787 TMEM14CQ9P0S9 112 aa12.77□□□□□ -0.37
SMC4-204ENST00000462787 H3BMG7 143 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 TRBV19A0A075B6N1 114 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 Q0VFX4 171 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 RRN3P1Q2M238 152 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
SMC4-204ENST00000462787 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 FAM168AQ92567 244 aa12.76□□□□□ -0.37
SMC4-204ENST00000462787 CEP290O15078 2479 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 DUX5Q96PT3 197 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 IGLC1P0CG04 106 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 FAM57AQ8TBR7 257 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 SAP30O75446 220 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
SMC4-204ENST00000462787 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 WDR86Q86TI4 376 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 C9orf172C9J069 976 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 LTAP01374 205 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
SMC4-204ENST00000462787 C15orf65H3BRN8 121 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 POU2AF1Q16633 256 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
SMC4-204ENST00000462787 BOD1L2Q8IYS8 172 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 NPFFR1Q9GZQ6 430 aa12.74□□□□□ -0.37
SMC4-204ENST00000462787 NDUFS7O75251 213 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 THAP8Q8NA92 274 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 K7ERJ3 54 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 ZNF688P0C7X2 276 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 IFITM1P13164 125 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 LINC00477Q96M19 166 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 H3BMM0 161 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
SMC4-204ENST00000462787 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
SMC4-204ENST00000462787 GLMPQ8WWB7 406 aa12.72□□□□□ -0.37
SMC4-204ENST00000462787 TMEM178BH3BS89 294 aa12.72□□□□□ -0.37
SMC4-204ENST00000462787 LY6EQ16553 131 aa12.72□□□□□ -0.37
SMC4-204ENST00000462787 C1QTNF4Q9BXJ3 329 aa12.72□□□□□ -0.37
SMC4-204ENST00000462787 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 NPYP01303 97 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 SLC25A16P16260 332 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
SMC4-204ENST00000462787 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
SMC4-204ENST00000462787 PAX8Q06710 450 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.37
SMC4-204ENST00000462787 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
SMC4-204ENST00000462787 RNASE6Q93091 150 aaKnown RBP12.71□□□□□ -0.37
SMC4-204ENST00000462787 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.38
SMC4-204ENST00000462787 HELZP42694 1942 aaKnown RBP12.71□□□□□ -0.38
SMC4-204ENST00000462787 TRGV11A0A075B6L2 103 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 C1orf122Q6ZSJ8 110 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 F8VRH5 84 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE5Q13069 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 GAGE6Q13070 117 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 DKK2Q9UBU2 259 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 DOCK8Q8NF50 2099 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 LGALS1P09382 135 aaKnown RBP12.7□□□□□ -0.38
SMC4-204ENST00000462787 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
SMC4-204ENST00000462787 C2orf66Q6UXQ4 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms