RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 H3BRN7 92 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 K7EN84 100 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 SCGB2A1O75556 95 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 FSHBP01225 129 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 G0S2P27469 103 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 TXN2Q99757 166 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 IL36BQ9NZH7 164 aa11.3□□□□□ -0.6
HDAC6-213ENST00000462730 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 TRBV9A0A0B4J1U6 114 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 H3BTX0 84 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 CBLN1P23435 193 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 GNG4P50150 75 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 FOXC2Q99958 501 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 TP53TG3Q9ULZ0 132 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
HDAC6-213ENST00000462730 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 SLC17A3O00476 420 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
HDAC6-213ENST00000462730 ZNF25P17030 456 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-213ENST00000462730 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-213ENST00000462730 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 AKAP9Q99996 3911 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 PEX7O00628 323 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 MYCNOSP40205 109 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-213ENST00000462730 LINC00310P59036 64 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 CHRDL1Q9BU40 450 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
HDAC6-213ENST00000462730 LINC00527Q9UJ94 153 aa11.28□□□□□ -0.6
HDAC6-213ENST00000462730 SLC25A5P05141 298 aaKnown RBP11.27□□□□□ -0.61
HDAC6-213ENST00000462730 CTSGP08311 255 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 GPR183P32249 361 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 GNG5P63218 68 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 Q6ZWC4 215 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 PGPA6NDG6 321 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 ZNF705FA8MVS1 300 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-213ENST00000462730 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-213ENST00000462730 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-213ENST00000462730 HIST1H1EP10412 219 aaKnown RBP11.27□□□□□ -0.61
HDAC6-213ENST00000462730 CRISP2P16562 243 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 OR4B1Q8NGF8 309 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
HDAC6-213ENST00000462730 HECTD1Q9ULT8 2610 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 FASNP49327 2511 aaKnown RBP11.26□□□□□ -0.61
HDAC6-213ENST00000462730 SERF1AO75920 110 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 LINC00479Q96M42 142 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 Q9H3A6 140 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 RPH3ALQ9UNE2 315 aa11.26□□□□□ -0.61
HDAC6-213ENST00000462730 CD33P20138 364 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 Q0VG73 95 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 TEX15Q9BXT5 2789 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 FLNAP21333 2647 aaKnown RBP11.25□□□□□ -0.61
HDAC6-213ENST00000462730 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 IGHG2P01859 326 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 IER3P46695 156 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 ATP5G2Q06055 141 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 OR5I1Q13606 314 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 GNB4Q9HAV0 340 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 CDC42EP3Q9UKI2 254 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 V9GYV3 84 aa11.25□□□□□ -0.61
HDAC6-213ENST00000462730 IGHV3-35A0A0C4DH35 117 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 IGLV2-8P01709 118 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 MT-ND6P03923 174 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 IGF1P05019 195 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 CLEC3BP05452 202 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
HDAC6-213ENST00000462730 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 SNURFLB1AK76 121 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 TRGV3P03979 118 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 IGLC2P0DOY2 106 aa11.23□□□□□ -0.61
HDAC6-213ENST00000462730 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
HDAC6-213ENST00000462730 BLCAPP62952 87 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms