RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 C11orf68Q9H3H3 251 aaKnown RBP10.88□□□□□ -0.67
ATG4B-213ENST00000460211 CLEC5AQ9NY25 188 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
ATG4B-213ENST00000460211 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
ATG4B-213ENST00000460211 C17orf112F2Z3M2 114 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 F6UB75 175 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 IFNA5P01569 189 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 RPL12P30050 165 aaKnown RBP10.87□□□□□ -0.67
ATG4B-213ENST00000460211 DEFB1P60022 68 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 FAM78BQ5VT40 261 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 ATP5SQ99766 215 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 MFFQ9GZY8 342 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 HSPB11Q9Y547 144 aa10.87□□□□□ -0.67
ATG4B-213ENST00000460211 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 ZNF705EA8MWA4 302 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-213ENST00000460211 MRPS12O15235 138 aaKnown RBP10.86□□□□□ -0.67
ATG4B-213ENST00000460211 CXCL3P19876 107 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 PSG3Q16557 428 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 GUK1Q16774 197 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 IGFL4Q6B9Z1 124 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 RNF182Q8N6D2 247 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 CSNK1G2-AS1Q8NCQ2 148 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 C11orf45Q8TAV5 145 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 WDR61Q9GZS3 305 aaKnown RBP10.86□□□□□ -0.67
ATG4B-213ENST00000460211 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
ATG4B-213ENST00000460211 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 AMBPP02760 352 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 FXYD7P58549 80 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 PMS2P11Q13670 270 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 PPP1R14DQ9NXH3 145 aa10.85□□□□□ -0.67
ATG4B-213ENST00000460211 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 IGHV4-28A0A0C4DH34 117 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 DEFB4AO15263 64 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
ATG4B-213ENST00000460211 FCN2Q15485 313 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
ATG4B-213ENST00000460211 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
ATG4B-213ENST00000460211 KLK5Q9Y337 293 aaPredicted RBP10.84□□□□□ -0.67
ATG4B-213ENST00000460211 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
ATG4B-213ENST00000460211 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 RHOBP62745 196 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 Q8NAQ8 132 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 OR11H7Q8NGC8 314 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 OR8A1Q8NGG7 326 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 SMIM3Q9BZL3 60 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 X6R8D5 127 aa10.83□□□□□ -0.68
ATG4B-213ENST00000460211 IGHV3OR16-12A0A075B7B8 117 aa10.82□□□□□ -0.68
ATG4B-213ENST00000460211 A8MTW9 85 aa10.82□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF253O75346 499 aa10.82□□□□□ -0.68
ATG4B-213ENST00000460211 SNRPCP09234 159 aaKnown RBP10.82□□□□□ -0.68
ATG4B-213ENST00000460211 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
ATG4B-213ENST00000460211 HIST1H1AQ02539 215 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-213ENST00000460211 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-213ENST00000460211 NEU1Q99519 415 aa10.82□□□□□ -0.68
ATG4B-213ENST00000460211 TMEM14CQ9P0S9 112 aa10.82□□□□□ -0.68
ATG4B-213ENST00000460211 TMEM189A5PLL7 270 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 H3BQ15 152 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 H3BTX0 84 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 GIPP09681 153 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF705DP0CH99 300 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF705BP0CI00 300 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 HLA-DMBP28068 263 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF705AQ6ZN79 300 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 OR10J6PQ8NGY7 276 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 PHLDA1Q8WV24 401 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 SAT2Q96F10 170 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 TMEM208Q9BTX3 173 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 MRPL32Q9BYC8 188 aaKnown RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 PARD6GQ9BYG4 376 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-213ENST00000460211 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 FRAS1Q86XX4 4008 aa10.81□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF705FA8MVS1 300 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-213ENST00000460211 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
ATG4B-213ENST00000460211 PDE6HQ13956 83 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 OXA1LQ15070 435 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 FFAR4Q5NUL3 377 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 IGF2BP2-AS1Q96M15 143 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 RFNGQ9Y644 331 aa10.8□□□□□ -0.68
ATG4B-213ENST00000460211 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 SLC17A3O00476 420 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 INSP01308 110 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 HBE1P02100 147 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 ZNF266Q14584 549 aa10.79□□□□□ -0.68
ATG4B-213ENST00000460211 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms