RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 C17orf77Q96MU5 243 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 PFDN5Q99471 154 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
RFX3-210ENST00000457373 FXYD6-FXYD2A0A087WZ82 144 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 ISLRO14498 428 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.22
RFX3-210ENST00000457373 CA1P00915 261 aaPredicted RBP7.4□□□□□ -1.22
RFX3-210ENST00000457373 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 GCSAMLQ5JQS6 135 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 GDF5OSQ5U4N7 250 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 Q6ZWC4 215 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 BPIFA4PQ86YQ2 179 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 OR2T35Q8NGX2 323 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 ASB13Q8WXK3 278 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
RFX3-210ENST00000457373 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
RFX3-210ENST00000457373 A0A087X0K7 114 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 F6UB75 175 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 H3BMM0 161 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 H3BTX0 84 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 HLA-DMBP28068 263 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 FAM78BQ5VT40 261 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 SPATA31B1PQ5VZV4 182 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
RFX3-210ENST00000457373 RNF182Q8N6D2 247 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 GATAD1Q8WUU5 269 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 RNF183Q96D59 192 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 SAV1Q9H4B6 383 aaPredicted RBP7.39□□□□□ -1.23
RFX3-210ENST00000457373 KCNIP2Q9NS61 270 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 RPRMQ9NS64 109 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 RFNGQ9Y644 331 aa7.39□□□□□ -1.23
RFX3-210ENST00000457373 SMLR1H3BR10 107 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 PRB4P10163 310 aaPredicted RBP7.38□□□□□ -1.23
RFX3-210ENST00000457373 SPP1P10451 314 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 HLA-DRB4P13762 266 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 FXYD7P58549 80 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 FFAR4Q5NUL3 377 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 EBLN2Q6P2I7 272 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 FOXI2Q6ZQN5 318 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 INO80EQ8NBZ0 244 aaPredicted RBP7.38□□□□□ -1.23
RFX3-210ENST00000457373 AQP10Q96PS8 301 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 EDA2RQ9HAV5 297 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 TP53TG1Q9Y2A0 90 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 HLA-DRB4X5D2U9 266 aa7.38□□□□□ -1.23
RFX3-210ENST00000457373 H3BQ15 152 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 ZNF705DP0CH99 300 aaPredicted RBP7.37□□□□□ -1.23
RFX3-210ENST00000457373 ZNF705BP0CI00 300 aaPredicted RBP7.37□□□□□ -1.23
RFX3-210ENST00000457373 PYYP10082 97 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 C4BPBP20851 252 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 NUTF2P61970 127 aaKnown RBP7.37□□□□□ -1.23
RFX3-210ENST00000457373 PSG3Q16557 428 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 LCN15Q6UWW0 184 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 HSD17B11Q8NBQ5 300 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 RARRES2Q99969 163 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 SLC50A1Q9BRV3 221 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
RFX3-210ENST00000457373 CLEC5AQ9NY25 188 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 TNFSF18Q9UNG2 199 aa7.37□□□□□ -1.23
RFX3-210ENST00000457373 A0A0J9YX75 114 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 RNF222A6NCQ9 220 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 G3V3Q6 166 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 GIG44P09565 113 aaPredicted RBP7.36□□□□□ -1.23
RFX3-210ENST00000457373 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 CXCL2P19875 107 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 ZNF266Q14584 549 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 OR11H2Q8NH07 326 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 SLC25A2Q9BXI2 301 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 MRPL32Q9BYC8 188 aaKnown RBP7.36□□□□□ -1.23
RFX3-210ENST00000457373 ZNF331Q9NQX6 463 aaPredicted RBP7.36□□□□□ -1.23
RFX3-210ENST00000457373 ZNF586Q9NXT0 402 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
RFX3-210ENST00000457373 A0A0J9YWU9 116 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 ZNF705FA8MVS1 300 aaPredicted RBP7.35□□□□□ -1.23
RFX3-210ENST00000457373 SLC17A3O00476 420 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 ARPC5O15511 151 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 EIF3GO75821 320 aaKnown RBP eCLIP7.35□□□□□ -1.23
RFX3-210ENST00000457373 DUSP14O95147 198 aaKnown RBP7.35□□□□□ -1.23
RFX3-210ENST00000457373 HIST1H1EP10412 219 aaKnown RBP7.35□□□□□ -1.23
RFX3-210ENST00000457373 PSG9Q00887 426 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 ACOT6Q3I5F7 207 aaPredicted RBP7.35□□□□□ -1.23
RFX3-210ENST00000457373 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 MUC7Q8TAX7 377 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 BLNKQ8WV28 456 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 SAT2Q96F10 170 aaPredicted RBP7.35□□□□□ -1.23
RFX3-210ENST00000457373 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 MFFQ9GZY8 342 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 SLC35B3Q9H1N7 401 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 HRH4Q9H3N8 390 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
RFX3-210ENST00000457373 BORCS7-ASMTA0A0B4J1R7 106 aa7.34□□□□□ -1.23
RFX3-210ENST00000457373 A0A1W2PPV4 95 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms