RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 MZT2BQ6NZ67 158 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 LINC00305Q7Z4B0 112 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 S100A7AQ86SG5 101 aa11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 YTHDF2Q9Y5A9 579 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-208ENST00000454134 CRXO43186 299 aaPredicted RBP11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 PSG3Q16557 428 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 PXDC1Q5TGL8 231 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 NIPSNAP3BQ9BS92 247 aa11.73□□□□□ -0.53
NCKIPSD-208ENST00000454134 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 TRAV12-2A0A075B6T6 113 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 H3BTX0 84 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 INSP01308 110 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 HTN3P15516 51 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 PVALBP20472 110 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 CAMLGP49069 296 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 RHOBP62745 196 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 IL15RAQ13261 267 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 ASAH1Q13510 395 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 RAB32Q13637 225 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 LINC00299Q6ZSB3 139 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 S100ZQ8WXG8 99 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
NCKIPSD-208ENST00000454134 BOLA2-SMG1P6H3BVE0 249 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 RAB31Q13636 194 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 OPCMLQ14982 345 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 MIC13Q5XKP0 118 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
NCKIPSD-208ENST00000454134 FRAS1Q86XX4 4008 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 BPIFA4PQ86YQ2 179 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 TMEM252Q8N6L7 170 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 LYRM2Q9NU23 88 aaPredicted RBP11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
NCKIPSD-208ENST00000454134 TRAV5A0A0B4J249 113 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 H3BQ15 152 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 SLC17A3O00476 420 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 UPK1BO75841 260 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 SIX6O95475 246 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 SULT1A1P50225 295 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 BAXQ07812 192 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 VWC2Q2TAL6 325 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 LCN15Q6UWW0 184 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 Q6ZRG5 221 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 ENKURQ8TC29 256 aa11.69□□□□□ -0.54
NCKIPSD-208ENST00000454134 A6NHS1 94 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 CXCL2P19875 107 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 AZU1P20160 251 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 DAD1P61803 113 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 IFITM3Q01628 133 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 STX12Q86Y82 276 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
NCKIPSD-208ENST00000454134 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 FGF7P21781 194 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 S100A11P31949 105 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 HBG1P69891 147 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 HBG2P69892 147 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 LINC01587Q99440 93 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 PARD6GQ9BYG4 376 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 GPN1Q9HCN4 374 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
NCKIPSD-208ENST00000454134 P0DMU3 169 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 HTN1P15515 57 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 RPL29P47914 159 aaKnown RBP11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 B2MP61769 119 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 OXA1LQ15070 435 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 FCN2Q15485 313 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 POM121L12Q8N7R1 296 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 OR1L4Q8NGR5 311 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 SAT2Q96F10 170 aaPredicted RBP11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
NCKIPSD-208ENST00000454134 PLAC8L1A1L4L8 177 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 NHLH2Q02577 135 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 KIR3DS1Q14943 382 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 PFDN5Q99471 154 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 PTTG2Q9NZH5 202 aa11.65□□□□□ -0.54
NCKIPSD-208ENST00000454134 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 DEFB130BP0DP73 79 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 DEFB130AP0DP74 79 aa11.64□□□□□ -0.55
NCKIPSD-208ENST00000454134 TSPOP30536 169 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms