RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 FXYD7P58549 80 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 FGL1Q08830 312 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 PSG3Q16557 428 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 Q6ZRG5 221 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 ZNF738Q8NE65 137 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 C20orf144Q9BQM9 153 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 SLC50A1Q9BRV3 221 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 SRRQ9GZT4 340 aa5.57□□□□□ -1.52
CD44-211ENST00000442151 A0A087X0K7 114 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 PRSS46E5RG02 174 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 H3BRN7 92 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 K7EPK0 472 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 SSSCA1O60232 199 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 GHRHP01286 108 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 LINC00869P0C866 280 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 GUK1Q16774 197 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 IAH1Q2TAA2 248 aaPredicted RBP5.56□□□□□ -1.52
CD44-211ENST00000442151 GDF5OSQ5U4N7 250 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 FAM222AQ5U5X8 452 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 LCN15Q6UWW0 184 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 ACOT7LQ6ZUV0 252 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 BPIFA4PQ86YQ2 179 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 CCDC28AQ8IWP9 274 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 OR1L4Q8NGR5 311 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 SLC35B3Q9H1N7 401 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 C20orf85Q9H1P6 137 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 GSKIPQ9P0R6 139 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 AGRNO00468 2067 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 FRAS1Q86XX4 4008 aa5.56□□□□□ -1.52
CD44-211ENST00000442151 IGKV1OR2-108A0A075B7D4 117 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 H3BP45 60 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 BOLA2-SMG1P6H3BVE0 249 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 CNN1P51911 297 aaKnown RBP5.55□□□□□ -1.52
CD44-211ENST00000442151 TAS2R60P59551 318 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 TMEM14EPQ6UXP3 125 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ZNF709Q8N972 641 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ZBTB8BQ8NAP8 495 aaPredicted RBP5.55□□□□□ -1.52
CD44-211ENST00000442151 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 OR10J6PQ8NGY7 276 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 MITD1Q8WV92 249 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 LINC01587Q99440 93 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ATG101Q9BSB4 218 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ARL6Q9H0F7 186 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 YTHDF2Q9Y5A9 579 aaKnown RBP5.55□□□□□ -1.52
CD44-211ENST00000442151 PXMP4Q9Y6I8 212 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 CBY3A6NI87 242 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 COX7A2P2O60397 106 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 METTL15P1P0C7V9 234 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 HTN3P15516 51 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 BCAP31P51572 246 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ATP6V1FQ16864 119 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ZNF767PQ75MW2 155 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 OR8A1Q8NGG7 326 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 C16orf74Q96GX8 76 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 PFDN5Q99471 154 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 ARV1Q9H2C2 271 aa5.55□□□□□ -1.52
CD44-211ENST00000442151 PLECQ15149 4684 aaKnown RBP5.54□□□□□ -1.52
CD44-211ENST00000442151 F6UB75 175 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 H7BYZ3 331 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 GATA2P23769 480 aaPredicted RBP5.54□□□□□ -1.52
CD44-211ENST00000442151 RRAS2P62070 204 aaPredicted RBP5.54□□□□□ -1.52
CD44-211ENST00000442151 HIST1H1AQ02539 215 aaPredicted RBP5.54□□□□□ -1.52
CD44-211ENST00000442151 C10orf113Q5VZT2 155 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 MZT2BQ6NZ67 158 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 SCRT1Q9BWW7 348 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 DNAJC4Q9NNZ3 241 aa5.54□□□□□ -1.52
CD44-211ENST00000442151 TIMM8BQ9Y5J9 83 aaPredicted RBP5.54□□□□□ -1.52
CD44-211ENST00000442151 LINC00854A0A1B0GVQ3 168 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 C5orf51A6NDU8 294 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 PRSS29PA6NIE9 313 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 PMS2P5A8MQ11 134 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 RLN2P04090 185 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 ATP5G1P05496 136 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 S100A11P31949 105 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 LEPP41159 167 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 CDKN1BP46527 198 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 ATP5G3P48201 142 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 CCL18P55774 89 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 HBG1P69891 147 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 HBG2P69892 147 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 BAK1Q16611 211 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 SPINK13Q1W4C9 94 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 AMTNQ6UX39 209 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 LINC00305Q7Z4B0 112 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 RPUSD4Q96CM3 377 aaKnown RBP5.53□□□□□ -1.52
CD44-211ENST00000442151 C20orf173Q96LM9 149 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 PRELID1Q9Y255 219 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 ZNF705GA8MUZ8 300 aaPredicted RBP5.53□□□□□ -1.52
CD44-211ENST00000442151 AGPAT2O15120 278 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 CXCL3P19876 107 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 C1orf134Q5TEV5 83 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 TMEM182Q6ZP80 229 aaPredicted RBP5.53□□□□□ -1.52
CD44-211ENST00000442151 LINC00299Q6ZSB3 139 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 STX12Q86Y82 276 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 ZNF431Q8TF32 576 aaPredicted RBP5.53□□□□□ -1.52
CD44-211ENST00000442151 C2orf50Q96LR7 162 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms