RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ZNF788Q6ZQV5 615 aa16.12■□□□□ 0.17
SHOX2-203ENST00000441443 RELNP78509 3460 aa16.12■□□□□ 0.17
SHOX2-203ENST00000441443 IGHV3-72A0A0B4J1Y9 119 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 IGLV2-23P01705 113 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 TNFAIP6P98066 277 aaPredicted RBP16.11■□□□□ 0.17
SHOX2-203ENST00000441443 SAMD13Q5VXD3 122 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 OR10X1Q8NGY0 326 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 ABHD17AQ96GS6 310 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 LINC00574Q9H8X3 128 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 TMSB15BA0A087X1C1 80 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 FBLL1A6NHQ2 334 aaKnown RBP16.11■□□□□ 0.17
SHOX2-203ENST00000441443 TNFRSF1AP19438 455 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 C8orf46Q8TAG6 207 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 C17orf77Q96MU5 243 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 TRGV9Q99603 122 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 OTORQ9NRC9 128 aa16.11■□□□□ 0.17
SHOX2-203ENST00000441443 TEX48A0A1B0GUV7 120 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 LGALS9BQ3B8N2 356 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 LGALS9CQ6DKI2 356 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 C16orf54Q6UWD8 224 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 OR9G4Q8NGQ1 327 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 DPF1Q92782 380 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 TMEM213A2RRL7 107 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 ENSAO43768 121 aaKnown RBP16.1■□□□□ 0.17
SHOX2-203ENST00000441443 FABP2P12104 132 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 AMN1Q8IY45 258 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 OR5A1Q8NGJ0 315 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 GTSF1LQ9H1H1 148 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 HIGD1AQ9Y241 93 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 PTPRQQ9UMZ3 2332 aa16.1■□□□□ 0.17
SHOX2-203ENST00000441443 ZNF414Q96IQ9 312 aa16.09■□□□□ 0.17
SHOX2-203ENST00000441443 MBD3L4A6NDZ8 208 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-203ENST00000441443 MBD3L3A6NE82 208 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-203ENST00000441443 MBD3L5A6NJ08 208 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-203ENST00000441443 CRIP1P50238 77 aa16.09■□□□□ 0.17
SHOX2-203ENST00000441443 SAMD5Q5TGI4 173 aa16.09■□□□□ 0.17
SHOX2-203ENST00000441443 MBD3L2Q8NHZ7 208 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-203ENST00000441443 TTTY13Q9BZ97 58 aa16.09■□□□□ 0.17
SHOX2-203ENST00000441443 CRYGCP07315 174 aa16.08■□□□□ 0.17
SHOX2-203ENST00000441443 PPIAL4GP0DN37 164 aa16.08■□□□□ 0.17
SHOX2-203ENST00000441443 PRELID3AQ96N28 172 aa16.08■□□□□ 0.17
SHOX2-203ENST00000441443 DKK2Q9UBU2 259 aa16.08■□□□□ 0.17
SHOX2-203ENST00000441443 PPIAL4CA0A0B4J2A2 164 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 GCSHP23434 173 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 OR4X2Q8NGF9 303 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 LINC00312Q9Y6C7 94 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 ZNF207O43670 478 aaKnown RBP16.08■□□□□ 0.16
SHOX2-203ENST00000441443 IGHV1-46P01743 117 aa16.08■□□□□ 0.16
SHOX2-203ENST00000441443 FCGR2BP31994 310 aaPredicted RBP16.07■□□□□ 0.16
SHOX2-203ENST00000441443 TIMM23BQ5SRD1 257 aa16.07■□□□□ 0.16
SHOX2-203ENST00000441443 SLC25A39Q9BZJ4 359 aaPredicted RBP16.07■□□□□ 0.16
SHOX2-203ENST00000441443 TACC2O95359 2948 aa16.07■□□□□ 0.16
SHOX2-203ENST00000441443 SMKR1H3BMG3 65 aa16.07■□□□□ 0.16
SHOX2-203ENST00000441443 K7ERJ3 54 aa16.07■□□□□ 0.16
SHOX2-203ENST00000441443 GLRXP35754 106 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 CCL8P80075 99 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 TCF15Q12870 199 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 SPTBN4Q9H254 2564 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 AZU1P20160 251 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 SMAGPQ0VAQ4 97 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 MRGPRG-AS1Q2M3A8 158 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 IFI27L1Q96BM0 104 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 C18orf15Q96N68 181 aa16.06■□□□□ 0.16
SHOX2-203ENST00000441443 K7EMI3 77 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 GATA4P43694 442 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 FXYD2P54710 66 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 VMA21Q3ZAQ7 101 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 LYZL1Q6UWQ5 148 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-203ENST00000441443 SPTBN1Q01082 2364 aaKnown RBP16.05■□□□□ 0.16
SHOX2-203ENST00000441443 CEACAM4O75871 244 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 S100A7AQ86SG5 101 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 C8orf49Q96NF6 230 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 PSG8Q9UQ74 426 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 SIVA1O15304 175 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 HBDP02042 147 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 SMIM13P0DJ93 91 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 CNTFRP26992 372 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 TMEM200BQ69YZ2 307 aa16.05■□□□□ 0.16
SHOX2-203ENST00000441443 Q6ZS92 163 aa16.04■□□□□ 0.16
SHOX2-203ENST00000441443 BCL6BQ8N143 479 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-203ENST00000441443 M0R3E3 92 aa16.04■□□□□ 0.16
SHOX2-203ENST00000441443 FCN3O75636 299 aa16.04■□□□□ 0.16
SHOX2-203ENST00000441443 HOXB4P17483 251 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-203ENST00000441443 PSG3Q16557 428 aa16.04■□□□□ 0.16
SHOX2-203ENST00000441443 SMIM17P0DL12 118 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 ORMDL3Q8N138 153 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 GATD1Q8NB37 220 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 IGKV2D-26A0A0A0MRZ7 120 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 A0A1W2PRD5 423 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 A0A1W2PRF3 423 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 A0A1W2PRM7 423 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 RBP4P02753 201 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 TMEM30BQ3MIR4 351 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 TMEM133Q9H2Q1 129 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 IGLV3-9A0A075B6K5 115 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 NDUFS7O75251 213 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 FAM104BQ5XKR9 115 aa16.03■□□□□ 0.16
SHOX2-203ENST00000441443 MED13LQ71F56 2210 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms