RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PSG9Q00887 426 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 BPIFA4PQ86YQ2 179 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 ZNF709Q8N972 641 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 THAP6Q8TBB0 222 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 LRRC20Q8TCA0 184 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 NPCDR1Q9BY65 106 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 SLC35B3Q9H1N7 401 aa17.13■□□□□ 0.33
VARS-217ENST00000440048 A8MTW9 85 aa17.12■□□□□ 0.33
VARS-217ENST00000440048 RBMY1A1P0DJD3 496 aaKnown RBP17.12■□□□□ 0.33
VARS-217ENST00000440048 RBMY1CP0DJD4 496 aa17.12■□□□□ 0.33
VARS-217ENST00000440048 CXCL3P19876 107 aa17.12■□□□□ 0.33
VARS-217ENST00000440048 HLA-DMBP28068 263 aa17.12■□□□□ 0.33
VARS-217ENST00000440048 RBMY1FQ15415 496 aaKnown RBP17.12■□□□□ 0.33
VARS-217ENST00000440048 ZNF738Q8NE65 137 aa17.12■□□□□ 0.33
VARS-217ENST00000440048 TRAV5A0A0B4J249 113 aa17.11■□□□□ 0.33
VARS-217ENST00000440048 SNRPCP09234 159 aaKnown RBP17.11■□□□□ 0.33
VARS-217ENST00000440048 C11orf45Q8TAV5 145 aa17.11■□□□□ 0.33
VARS-217ENST00000440048 MBD2Q9UBB5 411 aa17.11■□□□□ 0.33
VARS-217ENST00000440048 PLECQ15149 4684 aaKnown RBP17.11■□□□□ 0.33
VARS-217ENST00000440048 JTBO76095 146 aa17.1■□□□□ 0.33
VARS-217ENST00000440048 CXCL2P19875 107 aa17.1■□□□□ 0.33
VARS-217ENST00000440048 NANOS2P60321 138 aaKnown RBP17.1■□□□□ 0.33
VARS-217ENST00000440048 PSG3Q16557 428 aa17.1■□□□□ 0.33
VARS-217ENST00000440048 LCN15Q6UWW0 184 aa17.1■□□□□ 0.33
VARS-217ENST00000440048 HSPB11Q9Y547 144 aa17.1■□□□□ 0.33
VARS-217ENST00000440048 NUPR2A6NF83 97 aa17.09■□□□□ 0.33
VARS-217ENST00000440048 DUSP14O95147 198 aaKnown RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 ZNF705DP0CH99 300 aaPredicted RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 ZNF705BP0CI00 300 aaPredicted RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 IGLC2P0DOY2 106 aa17.09■□□□□ 0.33
VARS-217ENST00000440048 CNN1P51911 297 aaKnown RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 CEMP1Q6PRD7 247 aaPredicted RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 AMTNQ6UX39 209 aa17.09■□□□□ 0.33
VARS-217ENST00000440048 WDR61Q9GZS3 305 aaKnown RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 ZNF331Q9NQX6 463 aaPredicted RBP17.09■□□□□ 0.33
VARS-217ENST00000440048 RYR2Q92736 4967 aa17.09■□□□□ 0.33
VARS-217ENST00000440048 DNAH1Q9P2D7 4330 aa17.08■□□□□ 0.33
VARS-217ENST00000440048 H3BQ15 152 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 H3BTX0 84 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 RPL12P30050 165 aaKnown RBP17.08■□□□□ 0.32
VARS-217ENST00000440048 FCN2Q15485 313 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 GCSAMLQ5JQS6 135 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 ZNF705AQ6ZN79 300 aaPredicted RBP17.08■□□□□ 0.32
VARS-217ENST00000440048 OR11H7Q8NGC8 314 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 SLC50A1Q9BRV3 221 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 MFFQ9GZY8 342 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 MED28Q9H204 178 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 HRH4Q9H3N8 390 aa17.08■□□□□ 0.32
VARS-217ENST00000440048 SLC17A3O00476 420 aa17.07■□□□□ 0.32
VARS-217ENST00000440048 PHLDA1Q8WV24 401 aaPredicted RBP17.07■□□□□ 0.32
VARS-217ENST00000440048 ATP5SQ99766 215 aa17.07■□□□□ 0.32
VARS-217ENST00000440048 ZNF705FA8MVS1 300 aaPredicted RBP17.06■□□□□ 0.32
VARS-217ENST00000440048 OR8A1Q8NGG7 326 aa17.06■□□□□ 0.32
VARS-217ENST00000440048 SAT2Q96F10 170 aaPredicted RBP17.06■□□□□ 0.32
VARS-217ENST00000440048 SMIM3Q9BZL3 60 aa17.06■□□□□ 0.32
VARS-217ENST00000440048 IGHV3OR16-12A0A075B7B8 117 aa17.05■□□□□ 0.32
VARS-217ENST00000440048 PRB4P10163 310 aaPredicted RBP17.05■□□□□ 0.32
VARS-217ENST00000440048 HIST1H1AQ02539 215 aaPredicted RBP17.05■□□□□ 0.32
VARS-217ENST00000440048 RPUSD4Q96CM3 377 aaKnown RBP17.05■□□□□ 0.32
VARS-217ENST00000440048 NEU1Q99519 415 aa17.05■□□□□ 0.32
VARS-217ENST00000440048 ALMS1Q8TCU4 4167 aa17.04■□□□□ 0.32
VARS-217ENST00000440048 GUK1Q16774 197 aa17.04■□□□□ 0.32
VARS-217ENST00000440048 KCNIP2Q9NS61 270 aa17.04■□□□□ 0.32
VARS-217ENST00000440048 ZNF586Q9NXT0 402 aa17.04■□□□□ 0.32
VARS-217ENST00000440048 SPINK13Q1W4C9 94 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 RGS21Q2M5E4 152 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 C1orf158Q8N1D5 194 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 IGF2BP2-AS1Q96M15 143 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 TMEM14CQ9P0S9 112 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 KLK5Q9Y337 293 aaPredicted RBP17.03■□□□□ 0.32
VARS-217ENST00000440048 GOLT1BQ9Y3E0 138 aa17.03■□□□□ 0.32
VARS-217ENST00000440048 SMIM9A6NGZ8 99 aa17.02■□□□□ 0.32
VARS-217ENST00000440048 C17orf112F2Z3M2 114 aa17.02■□□□□ 0.32
VARS-217ENST00000440048 M0R2Z0 102 aa17.02■□□□□ 0.32
VARS-217ENST00000440048 AMBPP02760 352 aa17.02■□□□□ 0.32
VARS-217ENST00000440048 IFNA5P01569 189 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 PYYP10082 97 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 RHOBP62745 196 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 MIR17HGQ75NE6 70 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 SCGB1C1Q8TD33 95 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 SLC25A2Q9BXI2 301 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 WFDC1Q9HC57 220 aa17.01■□□□□ 0.31
VARS-217ENST00000440048 BOLA2-SMG1P6H3BVE0 249 aa17■□□□□ 0.31
VARS-217ENST00000440048 CRXO43186 299 aaPredicted RBP17■□□□□ 0.31
VARS-217ENST00000440048 ZNF253O75346 499 aa17■□□□□ 0.31
VARS-217ENST00000440048 HIST1H1EP10412 219 aaKnown RBP17■□□□□ 0.31
VARS-217ENST00000440048 FAM167A-AS1Q96KT0 104 aa17■□□□□ 0.31
VARS-217ENST00000440048 CELA1Q9UNI1 258 aa17■□□□□ 0.31
VARS-217ENST00000440048 TRBV19A0A075B6N1 114 aa16.99■□□□□ 0.31
VARS-217ENST00000440048 PRAC2D3DTV9 90 aa16.99■□□□□ 0.31
VARS-217ENST00000440048 PPP1R14DQ9NXH3 145 aa16.99■□□□□ 0.31
VARS-217ENST00000440048 RFNGQ9Y644 331 aa16.99■□□□□ 0.31
VARS-217ENST00000440048 INSP01308 110 aa16.98■□□□□ 0.31
VARS-217ENST00000440048 GIPP09681 153 aaPredicted RBP16.98■□□□□ 0.31
VARS-217ENST00000440048 FFAR4Q5NUL3 377 aa16.98■□□□□ 0.31
VARS-217ENST00000440048 BAP18Q8IXM2 172 aa16.98■□□□□ 0.31
VARS-217ENST00000440048 MRPL32Q9BYC8 188 aaKnown RBP16.98■□□□□ 0.31
VARS-217ENST00000440048 PARD6GQ9BYG4 376 aaPredicted RBP16.98■□□□□ 0.31
VARS-217ENST00000440048 NDUFB4O95168 129 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 HBE1P02100 147 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms