RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 EVX1P49640 407 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 NKX2-5P52952 324 aaPredicted RBP1.16□□□□□ -2.22
VPS41-207ENST00000439468 BATFQ16520 125 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 GUK1Q16774 197 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 C6orf52Q5T4I8 152 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 Q6ZS92 163 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 SLC36A1Q7Z2H8 476 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 TMEM86BQ8N661 226 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 ZNF676Q8N7Q3 588 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 OR1M1Q8NGA1 313 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 ANKRD7Q92527 254 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 CISHQ9NSE2 258 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 AK3Q9UIJ7 227 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 ANKRD36A6QL64 1941 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 DNAH2Q9P225 4427 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 DNAH11Q96DT5 4516 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 KIAA2026Q5HYC2 2103 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
VPS41-207ENST00000439468 FLG2Q5D862 2391 aaPredicted RBP1.15□□□□□ -2.22
VPS41-207ENST00000439468 A0A0J9YY10 115 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 A0A1B0GX78 115 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 LYPLA2O95372 231 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 MSNP26038 577 aaKnown RBP1.15□□□□□ -2.23
VPS41-207ENST00000439468 ARPP19P56211 112 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 DEFA1P59665 94 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 CCL7P80098 99 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 IFITM2Q01629 132 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 RELAQ04206 551 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 AKR1C1Q04828 323 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 PMAIP1Q13794 54 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 MOGQ16653 247 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 C9orf64Q5T6V5 341 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 TMEM42Q69YG0 159 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 C7orf65Q6ZTY9 151 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 ARL5BQ96KC2 179 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 CNBD2Q96M20 576 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 DOK5Q9P104 306 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 PKIGQ9Y2B9 76 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 EXPH5Q8NEV8 1989 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 SRRM2Q9UQ35 2752 aaKnown RBP1.15□□□□□ -2.23
VPS41-207ENST00000439468 VPS13DQ5THJ4 4388 aa1.15□□□□□ -2.23
VPS41-207ENST00000439468 A0A096LNT2 108 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 IGKV1D-43A0A0B4J1Z2 117 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 EEF1E1-BLOC1S5C9J1V9 151 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 ORC5O43913 435 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 KRT75O95678 551 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 TRGC1P0CF51 173 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 ZNF705DP0CH99 300 aaPredicted RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 ZNF705BP0CI00 300 aaPredicted RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 HIST1H1EP10412 219 aaKnown RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 FGF6P10767 208 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 KCNE1P15382 129 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 HMGA1P17096 107 aaKnown RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 MAGEA12P43365 314 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 RAB5BP61020 215 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 KISS1Q15726 138 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 DEFB133Q30KQ1 61 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 HIST2H3PS2Q5TEC6 136 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 FAM173BQ6P4H8 233 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 SLC7A6Q92536 515 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 SLC35B4Q969S0 331 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 Q96M85 177 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 DOHHQ9BU89 302 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 DDA1Q9BW61 102 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 MRPS26Q9BYN8 205 aaKnown RBP1.14□□□□□ -2.23
VPS41-207ENST00000439468 CHST6Q9GZX3 395 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 FAM96AQ9H5X1 160 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 EFCAB1Q9HAE3 211 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 MED29Q9NX70 200 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 UBAP1Q9NZ09 502 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 IL36BQ9NZH7 164 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 TP73-AS1Q9UF72 201 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 FAT1Q14517 4588 aa1.14□□□□□ -2.23
VPS41-207ENST00000439468 DNAJC13O75165 2243 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 FREM3P0C091 2139 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 A0A1B0GW54 56 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 DCTN3O75935 186 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 AHSA1O95433 338 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 IGHV3-7P01780 117 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 CRPP02741 224 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 SERPINA7P05543 415 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 MSMBP08118 114 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 EIF2B2P49770 351 aaKnown RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 MYL6P60660 151 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 SUPT4H1P63272 117 aaKnown RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 ITGB3BPQ13352 177 aaPredicted RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 LPCAT4Q643R3 524 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 PTRHD1Q6GMV3 140 aaKnown RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 Q6ZSA8 131 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 DYNAPQ8N1N2 210 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 RPP25LQ8N5L8 163 aaKnown RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 ROPN1LQ96C74 230 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 XAGE1AQ9HD64 81 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 C8orf4Q9NR00 106 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 LSM5Q9Y4Y9 91 aaKnown RBP1.13□□□□□ -2.23
VPS41-207ENST00000439468 KIAA1549Q9HCM3 1950 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 SCN3AQ9NY46 2000 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 DNAH6Q9C0G6 4158 aa1.13□□□□□ -2.23
VPS41-207ENST00000439468 LRP2P98164 4655 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms