RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 IGKV1D-13A0A0B4J2D9 117 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 IGKV1-13P0DP09 117 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 HAMPP81172 84 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 ZNF329Q86UD4 541 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 IMMP1LQ96LU5 166 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 MGAMO43451 1857 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 IGHG2P01859 326 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
PTCH1-209ENST00000437951 MESP1Q9BRJ9 268 aa9.5□□□□□ -0.89
PTCH1-209ENST00000437951 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 C18orf32Q8TCD1 76 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 LIME1Q9H400 295 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 SPXQ9BT56 116 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 LOC102723996A0A087X1L8 192 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 OOSP1A8MZH6 123 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 RHODO00212 210 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 SHANK3Q9BYB0 1731 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-209ENST00000437951 METRNQ9UJH8 293 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV2-5P01817 119 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 PMS2P5A8MQ11 134 aa9.49□□□□□ -0.89
PTCH1-209ENST00000437951 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-209ENST00000437951 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-209ENST00000437951 PRSS22Q9GZN4 317 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 NPYP01303 97 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 Q6ZS49 121 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 F6UB75 175 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 I3L3M4 83 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 SUPT4H1P63272 117 aaKnown RBP9.48□□□□□ -0.89
PTCH1-209ENST00000437951 KLRD1Q13241 179 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 GLMPQ8WWB7 406 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV2OR16-5A0A0B4J2B6 119 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 EIF4EBP2Q13542 120 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-209ENST00000437951 HLA-DRB4P13762 266 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 Q86TA4 180 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 HLA-DRB4X5D2U9 266 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 C1QCP02747 245 aa9.48□□□□□ -0.89
PTCH1-209ENST00000437951 RPP25Q9BUL9 199 aaKnown RBP9.48□□□□□ -0.89
PTCH1-209ENST00000437951 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
PTCH1-209ENST00000437951 C1orf53Q5VUE5 145 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 CRYBA4P53673 196 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 SMIM27A0A1W2PRY6 76 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 NBL1P41271 181 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 FAM231DQ6ZW35 169 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 CRLF1O75462 422 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
PTCH1-209ENST00000437951 SLC25A16P16260 332 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 USMG5Q96IX5 58 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 CECR9P0C854 216 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 COLCA1Q6ZS62 124 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-209ENST00000437951 IGHV2-70DA0A0C4DH43 119 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 YPEL3P61236 119 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-209ENST00000437951 BMPERQ8N8U9 685 aa9.46□□□□□ -0.89
PTCH1-209ENST00000437951 COLQQ9Y215 455 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-209ENST00000437951 NYNRINQ9P2P1 1898 aaKnown RBP9.46□□□□□ -0.89
PTCH1-209ENST00000437951 FAM104BQ5XKR9 115 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.9
PTCH1-209ENST00000437951 ANAPC1Q9H1A4 1944 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 C17orf100A8MU93 164 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 MRPL55Q7Z7F7 128 aaKnown RBP9.46□□□□□ -0.9
PTCH1-209ENST00000437951 PPP1R32Q7Z5V6 425 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 S4R3C0 116 aa9.46□□□□□ -0.9
PTCH1-209ENST00000437951 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 SIGLEC8Q9NYZ4 499 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 FDCSPQ8NFU4 85 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 BRWD3Q6RI45 1802 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 C5orf67F2Z3F1 127 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 F8VRH5 84 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 H3BMG7 143 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-209ENST00000437951 ORMDL1Q9P0S3 153 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 PKIGQ9Y2B9 76 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
PTCH1-209ENST00000437951 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 WBP1Q96G27 269 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 PSG7Q13046 419 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
PTCH1-209ENST00000437951 MP68P56378 58 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 Q6ZWC4 215 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 C1orf159Q96HA4 380 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 TP53TG1Q9Y2A0 90 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 CHCHD2Q9Y6H1 151 aaPredicted RBP9.44□□□□□ -0.9
PTCH1-209ENST00000437951 HGFACQ04756 655 aa9.44□□□□□ -0.9
PTCH1-209ENST00000437951 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms