RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 PSG9Q00887 426 aa13.11□□□□□ -0.31
CLOCK-203ENST00000435527 PMS2P11Q13670 270 aa13.11□□□□□ -0.31
CLOCK-203ENST00000435527 OR1L4Q8NGR5 311 aa13.11□□□□□ -0.31
CLOCK-203ENST00000435527 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
CLOCK-203ENST00000435527 TRAV5A0A0B4J249 113 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
CLOCK-203ENST00000435527 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 BPIFA4PQ86YQ2 179 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 PXMP4Q9Y6I8 212 aa13.1□□□□□ -0.31
CLOCK-203ENST00000435527 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
CLOCK-203ENST00000435527 PSG3Q16557 428 aa13.09□□□□□ -0.31
CLOCK-203ENST00000435527 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-203ENST00000435527 C11orf45Q8TAV5 145 aa13.09□□□□□ -0.31
CLOCK-203ENST00000435527 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
CLOCK-203ENST00000435527 PFDN5Q99471 154 aa13.09□□□□□ -0.31
CLOCK-203ENST00000435527 NPCDR1Q9BY65 106 aa13.09□□□□□ -0.31
CLOCK-203ENST00000435527 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 IGLC2P0DOY2 106 aa13.08□□□□□ -0.32
CLOCK-203ENST00000435527 CXCL2P19875 107 aa13.08□□□□□ -0.32
CLOCK-203ENST00000435527 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 NANOS2P60321 138 aaKnown RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 CLINT1Q14677 625 aa13.08□□□□□ -0.32
CLOCK-203ENST00000435527 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
CLOCK-203ENST00000435527 SAT2Q96F10 170 aaPredicted RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
CLOCK-203ENST00000435527 NUPR2A6NF83 97 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
CLOCK-203ENST00000435527 H3BQ15 152 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
CLOCK-203ENST00000435527 PET100P0DJ07 73 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 ZNF738Q8NE65 137 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 PHLDA1Q8WV24 401 aaPredicted RBP13.07□□□□□ -0.32
CLOCK-203ENST00000435527 NEU1Q99519 415 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 WDR61Q9GZS3 305 aaKnown RBP13.07□□□□□ -0.32
CLOCK-203ENST00000435527 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
CLOCK-203ENST00000435527 LYSTQ99698 3801 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 H3BTX0 84 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 RPL12P30050 165 aaKnown RBP13.06□□□□□ -0.32
CLOCK-203ENST00000435527 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 LCN15Q6UWW0 184 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 MFFQ9GZY8 342 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 MBD2Q9UBB5 411 aa13.06□□□□□ -0.32
CLOCK-203ENST00000435527 DNAH1Q9P2D7 4330 aa13.05□□□□□ -0.32
CLOCK-203ENST00000435527 SLC17A3O00476 420 aa13.05□□□□□ -0.32
CLOCK-203ENST00000435527 FCN2Q15485 313 aa13.05□□□□□ -0.32
CLOCK-203ENST00000435527 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
CLOCK-203ENST00000435527 OR8A1Q8NGG7 326 aa13.05□□□□□ -0.32
CLOCK-203ENST00000435527 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
CLOCK-203ENST00000435527 PRB4P10163 310 aaPredicted RBP13.04□□□□□ -0.32
CLOCK-203ENST00000435527 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
CLOCK-203ENST00000435527 ATP5SQ99766 215 aa13.04□□□□□ -0.32
CLOCK-203ENST00000435527 MED28Q9H204 178 aa13.04□□□□□ -0.32
CLOCK-203ENST00000435527 ZNF586Q9NXT0 402 aa13.04□□□□□ -0.32
CLOCK-203ENST00000435527 TMEM14CQ9P0S9 112 aa13.04□□□□□ -0.32
CLOCK-203ENST00000435527 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
CLOCK-203ENST00000435527 GUK1Q16774 197 aa13.03□□□□□ -0.32
CLOCK-203ENST00000435527 IGF2BP2-AS1Q96M15 143 aa13.03□□□□□ -0.32
CLOCK-203ENST00000435527 WFDC1Q9HC57 220 aa13.03□□□□□ -0.32
CLOCK-203ENST00000435527 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
CLOCK-203ENST00000435527 IGHV3OR16-12A0A075B7B8 117 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 JTBO76095 146 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 AMBPP02760 352 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
CLOCK-203ENST00000435527 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 SMIM3Q9BZL3 60 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 GOLT1BQ9Y3E0 138 aa13.02□□□□□ -0.33
CLOCK-203ENST00000435527 TRBV19A0A075B6N1 114 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 M0R2Z0 102 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 ZNF253O75346 499 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
CLOCK-203ENST00000435527 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 CELA1Q9UNI1 258 aa13.01□□□□□ -0.33
CLOCK-203ENST00000435527 HYDINQ4G0P3 5121 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 NDUFB4O95168 129 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 IFNA5P01569 189 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 PYYP10082 97 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 RHOBP62745 196 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 Q5BKY6 102 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 SLC25A2Q9BXI2 301 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 PARD6GQ9BYG4 376 aaPredicted RBP13□□□□□ -0.33
CLOCK-203ENST00000435527 KCNIP2Q9NS61 270 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 RFNGQ9Y644 331 aa13□□□□□ -0.33
CLOCK-203ENST00000435527 BOLA2-SMG1P6H3BVE0 249 aa12.99□□□□□ -0.33
CLOCK-203ENST00000435527 OXA1LQ15070 435 aa12.99□□□□□ -0.33
CLOCK-203ENST00000435527 RGS21Q2M5E4 152 aa12.99□□□□□ -0.33
CLOCK-203ENST00000435527 C12orf74Q32Q52 190 aa12.99□□□□□ -0.33
CLOCK-203ENST00000435527 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
CLOCK-203ENST00000435527 ALMS1Q8TCU4 4167 aa12.98□□□□□ -0.33
CLOCK-203ENST00000435527 TRAV12-2A0A075B6T6 113 aa12.98□□□□□ -0.33
CLOCK-203ENST00000435527 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
CLOCK-203ENST00000435527 Q6ZTC4 211 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms