RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MUC4Q99102 2169 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 H3BTX0 84 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 TSC22D2O75157 780 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 DUSP14O95147 198 aaKnown RBP12.04□□□□□ -0.48
CPSF4-203ENST00000430038 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
CPSF4-203ENST00000430038 TAS2R30P59541 319 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 DAD1P61803 113 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 SELENOTP62341 195 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 HIST1H1AQ02539 215 aaPredicted RBP12.04□□□□□ -0.48
CPSF4-203ENST00000430038 LGALS9BQ3B8N2 356 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 TEPPQ6URK8 271 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 OR10P1Q8NGE3 313 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 FAM210BQ96KR6 192 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 MGST2Q99735 147 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
CPSF4-203ENST00000430038 PARD6GQ9BYG4 376 aaPredicted RBP12.04□□□□□ -0.48
CPSF4-203ENST00000430038 SLC17A3O00476 420 aa12.03□□□□□ -0.48
CPSF4-203ENST00000430038 AGPAT2O15120 278 aa12.03□□□□□ -0.48
CPSF4-203ENST00000430038 LINC00336Q6ZUF6 198 aa12.03□□□□□ -0.48
CPSF4-203ENST00000430038 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
CPSF4-203ENST00000430038 C20orf85Q9H1P6 137 aa12.03□□□□□ -0.48
CPSF4-203ENST00000430038 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.49
CPSF4-203ENST00000430038 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
CPSF4-203ENST00000430038 BOLA2-SMG1P6H3BVE0 249 aa12.02□□□□□ -0.49
CPSF4-203ENST00000430038 INSP01308 110 aa12.02□□□□□ -0.49
CPSF4-203ENST00000430038 LINC00305Q7Z4B0 112 aa12.02□□□□□ -0.49
CPSF4-203ENST00000430038 ZNF331Q9NQX6 463 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-203ENST00000430038 RYR1P21817 5038 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 TRAV6A0A075B6T7 132 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 TRAV5A0A0B4J249 113 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 CENPXA8MT69 81 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 H3BQ15 152 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 LYRM1O43325 122 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 TCRBP04435 133 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 RHOBP62745 196 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 RPUSD4Q96CM3 377 aaKnown RBP12.01□□□□□ -0.49
CPSF4-203ENST00000430038 MGAT4CQ9UBM8 478 aa12.01□□□□□ -0.49
CPSF4-203ENST00000430038 FAM24AA6NFZ4 105 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 GOSR2O14653 212 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 TSPOP30536 169 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 IL15RAQ13261 267 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 OPCMLQ14982 345 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 UBE2DNLQ8IWF7 75 aa12□□□□□ -0.49
CPSF4-203ENST00000430038 SAT2Q96F10 170 aaPredicted RBP12□□□□□ -0.49
CPSF4-203ENST00000430038 LSM5Q9Y4Y9 91 aaKnown RBP12□□□□□ -0.49
CPSF4-203ENST00000430038 LYRM9A8MSI8 78 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 CST7O76096 145 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 RNF212Q495C1 297 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 MIC13Q5XKP0 118 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 LINC01587Q99440 93 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 GGACTQ9BVM4 153 aa11.99□□□□□ -0.49
CPSF4-203ENST00000430038 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
CPSF4-203ENST00000430038 HTN1P15515 57 aa11.98□□□□□ -0.49
CPSF4-203ENST00000430038 S100A7P31151 101 aa11.98□□□□□ -0.49
CPSF4-203ENST00000430038 ZNF546Q86UE3 836 aa11.98□□□□□ -0.49
CPSF4-203ENST00000430038 LRRC20Q8TCA0 184 aa11.98□□□□□ -0.49
CPSF4-203ENST00000430038 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
CPSF4-203ENST00000430038 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
CPSF4-203ENST00000430038 NRARPQ7Z6K4 114 aa11.97□□□□□ -0.49
CPSF4-203ENST00000430038 ZNF431Q8TF32 576 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-203ENST00000430038 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
CPSF4-203ENST00000430038 ABCA13Q86UQ4 5058 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 IGSF23A1L1A6 192 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 F5H768 121 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 CDKN1BP46527 198 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 CAMLGP49069 296 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 TAS2R60P59551 318 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 B2MP61769 119 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 CNPY1Q3B7I2 92 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 LCN15Q6UWW0 184 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 RNASE8Q8TDE3 154 aaKnown RBP11.96□□□□□ -0.49
CPSF4-203ENST00000430038 WDR83OSQ9Y284 106 aa11.96□□□□□ -0.49
CPSF4-203ENST00000430038 C5orf51A6NDU8 294 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 COX7A2P2O60397 106 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 CXCL2P19875 107 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 BCAP31P51572 246 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 VWC2Q2TAL6 325 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 BPIFA4PQ86YQ2 179 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 C12orf45Q8N5I9 185 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-203ENST00000430038 C2orf50Q96LR7 162 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
CPSF4-203ENST00000430038 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
CPSF4-203ENST00000430038 CBY3A6NI87 242 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 L7N2F9 121 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 CT45A10P0DMU9 189 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 CAV2P51636 162 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 VAMP2P63027 116 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 RAB32Q13637 225 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 TMEM256Q8N2U0 113 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 ZNRF2Q8NHG8 242 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 SLC50A1Q9BRV3 221 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
CPSF4-203ENST00000430038 H2AFB2P0C5Z0 115 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms