RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ZNF25P17030 456 aaPredicted RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 SRSF1Q07955 248 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPL28-202ENST00000426763 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 PRDM13Q9H4Q3 707 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 TRGV1A0A0A0MS02 117 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 COTL1Q14019 142 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 TCF23Q7RTU1 214 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 SH2D1AO60880 128 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 POU2AF1Q16633 256 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 H3BUA1 57 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 WISP2O76076 250 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 C1QL4Q86Z23 238 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
RPL28-202ENST00000426763 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
RPL28-202ENST00000426763 VCX2Q9H322 139 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 H7C2G1 150 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 CYSLTR1Q9Y271 337 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 GZMBP10144 247 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
RPL28-202ENST00000426763 AMBPP02760 352 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
RPL28-202ENST00000426763 HOXA5P20719 270 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 ADMP35318 185 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 PAX9P55771 341 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 TOMM7Q9P0U1 55 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 CRPP02741 224 aa11.07□□□□□ -0.64
RPL28-202ENST00000426763 TRAV8-1A0A0A6YYK1 113 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 LYZL1Q6UWQ5 148 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 NRGNQ92686 78 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 RPLP1P05386 114 aaKnown RBP11.06□□□□□ -0.64
RPL28-202ENST00000426763 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 MALP21145 153 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 MALRD1Q5VYJ5 2156 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 HBDP02042 147 aa11.06□□□□□ -0.64
RPL28-202ENST00000426763 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
RPL28-202ENST00000426763 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
RPL28-202ENST00000426763 EVI2AP22794 236 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 Q86TA4 180 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.649e-9■■■□□ 18.6
RPL28-202ENST00000426763 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 CENPVL3A0A0U1RRI6 287 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 LINC01549A6NIU2 74 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 ERCC8Q13216 396 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 LINC00614P0C842 121 aa11.05□□□□□ -0.64
RPL28-202ENST00000426763 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
RPL28-202ENST00000426763 OTOGLQ3ZCN5 2332 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 SERF1AO75920 110 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 FOXL1Q12952 345 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 DPH3P1Q9H4G8 78 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 HINT1P49773 126 aaPredicted RBP11.04□□□□□ -0.64
RPL28-202ENST00000426763 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 CD28P10747 220 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 MST1LQ2TV78 715 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
RPL28-202ENST00000426763 MUC22E2RYF6 1773 aaPredicted RBP11.03□□□□□ -0.64
RPL28-202ENST00000426763 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 OR13C6PQ8NH95 151 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 DENND4AQ7Z401 1863 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
RPL28-202ENST00000426763 TMEM75Q8N9X5 138 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 SMIM12Q96EX1 92 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
RPL28-202ENST00000426763 A0A087WX48 190 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 H3BRN7 92 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
RPL28-202ENST00000426763 PTPRQQ9UMZ3 2332 aa11.02□□□□□ -0.64
RPL28-202ENST00000426763 NDUFA3O95167 84 aa11.02□□□□□ -0.64
RPL28-202ENST00000426763 VGLL1Q99990 258 aa11.02□□□□□ -0.64
RPL28-202ENST00000426763 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
RPL28-202ENST00000426763 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms