RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 BMI1P35226 326 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 PSG9Q00887 426 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 SIGLEC15Q6ZMC9 328 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
GINS3-203ENST00000426538 TCEAL7Q9BRU2 100 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 RHPN1-AS1Q9BWJ2 59 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 SMAD5-AS1Q9Y6J3 95 aa11.54□□□□□ -0.56
GINS3-203ENST00000426538 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 MYCNOSP40205 109 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 C8orf86Q6ZUL3 223 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 REC114Q7Z4M0 266 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 CMTM2Q8TAZ6 248 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 EPDR1Q9UM22 224 aa11.53□□□□□ -0.56
GINS3-203ENST00000426538 HELTA6NFD8 242 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 M0R036 132 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 MEOX2P50222 304 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 KLF5Q13887 457 aaPredicted RBP11.52□□□□□ -0.56
GINS3-203ENST00000426538 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 EXOC3-AS1Q8N2X6 119 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 C5orf17Q8NAS9 161 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 TVP23CQ96ET8 276 aa11.52□□□□□ -0.56
GINS3-203ENST00000426538 A0A087X0K7 114 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 SLC17A3O00476 420 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 CHEK1O14757 476 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 SLURP1P55000 103 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
GINS3-203ENST00000426538 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 DERL1Q9BUN8 251 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 NAT8Q9UHE5 227 aa11.52□□□□□ -0.57
GINS3-203ENST00000426538 A8MWP6 167 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 ZNF253O75346 499 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
GINS3-203ENST00000426538 CLRN3Q8NCR9 226 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 RPH3ALQ9UNE2 315 aa11.51□□□□□ -0.57
GINS3-203ENST00000426538 TMEM213A2RRL7 107 aa11.5□□□□□ -0.57
GINS3-203ENST00000426538 PEX7O00628 323 aa11.5□□□□□ -0.57
GINS3-203ENST00000426538 AKR1C3P42330 323 aa11.5□□□□□ -0.57
GINS3-203ENST00000426538 RPL35P42766 123 aaKnown RBP11.5□□□□□ -0.57
GINS3-203ENST00000426538 CSN1S1P47710 185 aa11.5□□□□□ -0.57
GINS3-203ENST00000426538 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
GINS3-203ENST00000426538 FOXL1Q12952 345 aa11.5□□□□□ -0.57
GINS3-203ENST00000426538 CCL24O00175 119 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 GNG5P63218 68 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 ATG101Q9BSB4 218 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 SDF2L1Q9HCN8 221 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 ZNF331Q9NQX6 463 aaPredicted RBP11.49□□□□□ -0.57
GINS3-203ENST00000426538 M0QZ24 198 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 TCRAP04437 139 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 CBLN1P23435 193 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 UBE2G1P62253 170 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
GINS3-203ENST00000426538 SETD2Q9BYW2 2564 aaPredicted RBP11.48□□□□□ -0.57
GINS3-203ENST00000426538 C2orf70A6NJV1 201 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 K7EQM0 130 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 EDN2P20800 178 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 GNG4P50150 75 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 OR9G4Q8NGQ1 327 aa11.48□□□□□ -0.57
GINS3-203ENST00000426538 DLX4Q92988 240 aaPredicted RBP11.48□□□□□ -0.57
GINS3-203ENST00000426538 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
GINS3-203ENST00000426538 S100A9P06702 114 aaKnown RBP11.47□□□□□ -0.57
GINS3-203ENST00000426538 FOLR2P14207 255 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 TAS2R60P59551 318 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 ADIRFQ15847 76 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
GINS3-203ENST00000426538 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 RPS10P5Q9NQ39 176 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
GINS3-203ENST00000426538 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 C9JCJ5 164 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 M0R3E3 92 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 SCO1O75880 301 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 RHEBQ15382 184 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 PRELID1Q9Y255 219 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.57
GINS3-203ENST00000426538 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.58
GINS3-203ENST00000426538 C7orf77A4D0Y5 90 aa11.46□□□□□ -0.58
GINS3-203ENST00000426538 B4DEV8 164 aa11.46□□□□□ -0.58
GINS3-203ENST00000426538 DIRC3C9JPN6 131 aa11.46□□□□□ -0.58
GINS3-203ENST00000426538 RPL23P62829 140 aaKnown RBP11.46□□□□□ -0.58
GINS3-203ENST00000426538 FHL3Q13643 280 aa11.46□□□□□ -0.58
GINS3-203ENST00000426538 TMEM183BQ1AE95 376 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms